PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953886.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 305aa    MW: 34868.8 Da    PI: 9.5083
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953886.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR195.18.3e-30136222289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + k+ +++r++ra tr gCka+++vkkek+gkw vtk++++HnH+l
  XP_022953886.1 136 FYDAYASRLGFVIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKR-SENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPL 222
                     9*******************************************99.9**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MNSFSEHNID FHSPYFTKQM HFLPSCIGRN QSEFLDSAFF RLFLRQSPSI YSIPASILRS  60
SIYFSSIVDE FGKIRLVFLV VDGIPTAIED GDAVENPSGK PLARIVSEAE ATATNISDTE  120
PYVGMEFESE ESAKVFYDAY ASRLGFVIRV DAFRRSMRDG SVVWRRLVCN KEGFRKFRPK  180
RSENRKPRAI TREGCKAMVV VKKEKSGKWI VTKFVKDHNH PLIVTPASAR RNVLLSQTRD  240
EKDAKIRELT AKLQLERKRC AAYQEQLAMI LRDMEDHSNH LAINIDDIVQ SVKDIESKSN  300
TFSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.18e-91FAR1 family protein