PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953682.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1057aa MW: 117542 Da PI: 9.9195

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953682.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.4	7.7e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g++ +qV+ +F +R + +k XP_022953682.1 69 KRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1057 aa Download sequence
MEVLKDDLSN LEIGNSAESF QKFLDSQKDL FRSQVDQLQR IVVTQCKLTG VNPLSQEMAA 60 GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR 120 SRVRKLVRLS REKSIQSSSC KQLEAGRIAI DNDPSMPIDA VPLNSAAVVP FNSDAPIQLN 180 SEAPVPLNID TPVPLNTIKP SNVDNGPSCS TQDSELSGID GIDKHFVQTI FSMMQKEETF 240 SGQVKLMEWI LQIQNSSVLC WFLTKGGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH 300 KALPVHISAI LQSVNNLRFY RTSDISNRAR FLLSRWSKLL TRSQALKKPN GMKLLTNSQT 360 DMILKQSIGD IMYDESWKSN IDVPENFSSS IVNVDNTRKL EPRQALKLLP ASSDDLHRKN 420 VLGLSSSRFR ERRKIQMVEQ PEQKSTARNS QAPRTSPVSR GRPMSTDDIQ KAKMRAQFMQ 480 SKYGKTGSSN GRMKSENVNK PLPLVSGALS PAPKTSLHPK FEDQKKAMVL SPKISNKVET 540 PLHSKIEVGF KDSLGEKCKR VQIQWRMPPE MKHNDLWRVG GGENSKEAGF QNIRNSREKE 600 TFYQTILDIP SNPKEPWDLE MDYDDSLTPE VLTEQLPDNE SSETEVRNHV VDAAVPSEVI 660 SSQDPKSNAD EPDLELLAVL LKNPELVYAL TSSQAGNLPA EETVKLLDMI KASGANNLGS 720 VNRMEKAVEK VEVSLPSPTP SSNAGTSGWK PAALRNPFSQ RDSIAESRVA LASPPVDASS 780 IAVSRVPNQQ HAAMPSVSHQ LPASVSQFSL PQTMINGRQS HHVLHSHQHQ QGIVNSPNVQ 840 LPNSEIALAL RSFPITNEPL VNQLTAAVSS VRVEGGNVVK PVTFASNIPE RVPISFHSPP 900 SPTPTRMPLI QQQRQQSQIQ PFRSEHPHQT RVNISLPPSE KSAPSLGSWK PRQQDIGSHY 960 NSGTNQRSDS KFVGGSMAAR GGPSWGRNEF ESWSPENSPV RTQEYSRPDK SISEPRTNSG 1020 RSYGPADQQQ RQRSPYGYQE QNRHGTNNNR RWRDRQF

Sequence ? help Back to Top

Protein Sequence Length: 1057 aa Download sequence

MEVLKDDLSN LEIGNSAESF QKFLDSQKDL FRSQVDQLQR IVVTQCKLTG VNPLSQEMAA  60
GALSITIGKR PRDLLNPKAV KYMQTVFSIK DALSKKESRE ISALFGVKVA QVRDFFNSQR  120
SRVRKLVRLS REKSIQSSSC KQLEAGRIAI DNDPSMPIDA VPLNSAAVVP FNSDAPIQLN  180
SEAPVPLNID TPVPLNTIKP SNVDNGPSCS TQDSELSGID GIDKHFVQTI FSMMQKEETF  240
SGQVKLMEWI LQIQNSSVLC WFLTKGGAII LATWLSQAAA EEQTSLLHVI LEVFCHLPLH  300
KALPVHISAI LQSVNNLRFY RTSDISNRAR FLLSRWSKLL TRSQALKKPN GMKLLTNSQT  360
DMILKQSIGD IMYDESWKSN IDVPENFSSS IVNVDNTRKL EPRQALKLLP ASSDDLHRKN  420
VLGLSSSRFR ERRKIQMVEQ PEQKSTARNS QAPRTSPVSR GRPMSTDDIQ KAKMRAQFMQ  480
SKYGKTGSSN GRMKSENVNK PLPLVSGALS PAPKTSLHPK FEDQKKAMVL SPKISNKVET  540
PLHSKIEVGF KDSLGEKCKR VQIQWRMPPE MKHNDLWRVG GGENSKEAGF QNIRNSREKE  600
TFYQTILDIP SNPKEPWDLE MDYDDSLTPE VLTEQLPDNE SSETEVRNHV VDAAVPSEVI  660
SSQDPKSNAD EPDLELLAVL LKNPELVYAL TSSQAGNLPA EETVKLLDMI KASGANNLGS  720
VNRMEKAVEK VEVSLPSPTP SSNAGTSGWK PAALRNPFSQ RDSIAESRVA LASPPVDASS  780
IAVSRVPNQQ HAAMPSVSHQ LPASVSQFSL PQTMINGRQS HHVLHSHQHQ QGIVNSPNVQ  840
LPNSEIALAL RSFPITNEPL VNQLTAAVSS VRVEGGNVVK PVTFASNIPE RVPISFHSPP  900
SPTPTRMPLI QQQRQQSQIQ PFRSEHPHQT RVNISLPPSE KSAPSLGSWK PRQQDIGSHY  960
NSGTNQRSDS KFVGGSMAAR GGPSWGRNEF ESWSPENSPV RTQEYSRPDK SISEPRTNSG  1020
RSYGPADQQQ RQRSPYGYQE QNRHGTNNNR RWRDRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein