PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022953565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YA | ||||||||
Protein Properties | Length: 317aa MW: 35107 Da PI: 7.2184 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 105 | 6.7e-33 | 149 | 205 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF XP_022953565.1 149 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 205 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MPSKPENVDQ QIVDGSKYLV QSTKYSGAWW NGVGNNTIAG EDATKTASAD YLNDTVSSGG 60 TQSQGNDENI GKEVQHLKYI PFSASPPVGE RLDLNSQMEL VGHSIVLTSY PFSDAQYCQM 120 LTSNGPQSTF PHIYGLHHAR MPLPLEMEEE PVYVNAKQYH GILRRRQSRA KAELEKKVIK 180 SRKPYLHESR HLHAMRRARG SGGRFLNTKK PNNVISNTDR EEGINSGANH STKPVSEAGS 240 KYMAADENGI KDTLNEEDKE FMTQNLQITR AFFNGKLNGH GISTYTSQLA DVEGGHLDQP 300 HESMQVNGAP QRAIPIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 3e-32 | NF-YA family protein |