PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953302.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 469aa MW: 51385.6 Da PI: 6.3552

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953302.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+ +++ ++ +H ++ XP_022953302.1 113 FECPICGQNYRSEEEVSVHVDSC 135 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MGDVKDKVKG FMKRFNNPLS SSSSTSFKGQ GRVLGSSSSG STTSLPTRPL QNPISNPNLA 60 KPPVANSISA APTRPHLSIK STPERSPADG FDPFDSFITS GKKSGNGYSL NVFECPICGQ 120 NYRSEEEVSV HVDSCVDDNT ARRPPDLLLT NDAESPSELE GCLGIFLSGK PSQGSLKIIL 180 TLLRNIIREP ENSKFRKIRL SNPKIKEAIG EAVGGVELLE FVGFKLQEQD GEMWATMEVP 240 TEEQINILSK VIDSIDQPKL DEQEKKGSST ASTASTDQLI EPKKVDRQTR VFFAIPENVA 300 ANIELPDSFY KLSVEEVKRE AVMRKQKIAE SQLLVPKSYK EKQAKAARRK YNRTVIRIQF 360 PDGVVLQGIF SPWEPTSALY EFVSTALKEP SLEFELIQPV GVKRRAIAHF PAVGEKAKTL 420 DDLELVPSAL VKFRPIETDA VVFTGLCNEL LEIIEPLVSG SAVAPPAQG

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MGDVKDKVKG FMKRFNNPLS SSSSTSFKGQ GRVLGSSSSG STTSLPTRPL QNPISNPNLA  60
KPPVANSISA APTRPHLSIK STPERSPADG FDPFDSFITS GKKSGNGYSL NVFECPICGQ  120
NYRSEEEVSV HVDSCVDDNT ARRPPDLLLT NDAESPSELE GCLGIFLSGK PSQGSLKIIL  180
TLLRNIIREP ENSKFRKIRL SNPKIKEAIG EAVGGVELLE FVGFKLQEQD GEMWATMEVP  240
TEEQINILSK VIDSIDQPKL DEQEKKGSST ASTASTDQLI EPKKVDRQTR VFFAIPENVA  300
ANIELPDSFY KLSVEEVKRE AVMRKQKIAE SQLLVPKSYK EKQAKAARRK YNRTVIRIQF  360
PDGVVLQGIF SPWEPTSALY EFVSTALKEP SLEFELIQPV GVKRRAIAHF PAVGEKAKTL  420
DDLELVPSAL VKFRPIETDA VVFTGLCNEL LEIIEPLVSG SAVAPPAQG