PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952971.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1676aa MW: 188211 Da PI: 6.1402

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952971.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.5e-18	19	75	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+++ ++yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022952971.1 19 KTKRKMKTASQLEILEKAYMVEPYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 75 6799***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1676 aa Download sequence
MEVSSEGEKK PPPPVEATKT KRKMKTASQL EILEKAYMVE PYPSEALRAE LSVKLGLSDR 60 QLQMWFCHRR LKDRKPPPVK QPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH 120 PVDVRPGVAV ARIGLNLPSM NKFYESQQSI AELRAIALVE AQLGEALRED GPILGMEFDP 180 LPPGAFGAPI GVTAVSDDEK KTGQFFEGSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK 240 SDERERDTSS YQYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLNIVAQQ 300 SRRSHNLLSS MGEHDNSLCR SSLVNISMNP LYGTHSTSHP EFTSVLSDKR VVRGNNVVWI 360 EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREEQI RKEMERHDRE RRREEERLLR 420 EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ 480 MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKGMRPNF PPESVQMRRP 540 FPDHPWIESE ANVGNLLMAW KFLVTFADVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL 600 KCIIKDVEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE 660 ILRQLALSGG FGPQQRKGGN AEPAHHDENE QGNDVADIIS NLRNGLAAEK AVAIMQERGF 720 SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA 780 ALSRDSKLFE RTAPSTYCVR SPYRKDPGDA DAILSTARER IRTFKSGILD GDDAERDDGS 840 EVDVPEDAEV HDLGTGGNLT KQHQSPEVCP LDEMTSVASG NGCNEISDIC KVGMANGGPY 900 TAILDIKGDH GEPWVQGLTE GEYSDLSVEE RLNALCSLIG VALEGNSMRT VLEERLEAAN 960 SLKKQMLAEA QIDKRRVKEE YVLQIHDSSS VGNKSEFKTM SSLDATRLSA ILNIGEENRE 1020 GPLDTGFQQE DCHSSHNNCP SEGLQVQDVL VEADNSQLQH SVVAVEKSRS QVKSYIGHKA 1080 EEMYVYRSLP LGQDRRRNRY WQFTSSASRN EPGNGRIFVE LHNGSWRLID SAKGFDALLA 1140 SLDVRGIRES HLHLMLQKLE KSFKTATRGN ILQDSQRTGE DAAGQHCNAH NNGPSNTVYA 1200 DNHDGFESST SFRSEAEETG SDTTESLKRY LDFESWMRRE CFSLSVLSAN KHGKKQGTQL 1260 LENIGLSWCS SSPLRIRLLK MLLTLIEVSI PGEAFQPSWT DFERKTWSSK LLSSSSAEDV 1320 LQILTLLENG IKRDFMWSNY ETTYELLACF NPTGSYTCHS SFPETVPVLP WIPLTTAAVA 1380 LRLLEFEASL SYILQQKAES QAQGSMDIKP LSDSATAVIS NEHVKEANLI YGGVGPSSSD 1440 YGQLDSKRGH GRIRGGKSHK RTNSMRPVSD KSTGNNRNNR KILRQVLMWE DGQMEEQGGF 1500 RRGRRSARSR QKSGRKIKFG SEGGHPEETI NETSKLSLDN SHEWNDDQNI RMLQRSDGSP 1560 NSSDRLISID NSGRVEYDDM LVDDRARSWQ AGYLPTSRSY KMDEDREDDL SAGERGNTMD 1620 KEYKEYDLSD GGRGNVMDEE RDLYVEHYTD GEYNEESNRN LEDNMELQSA SSDYSN

Sequence ? help Back to Top

Protein Sequence Length: 1676 aa Download sequence

MEVSSEGEKK PPPPVEATKT KRKMKTASQL EILEKAYMVE PYPSEALRAE LSVKLGLSDR  60
QLQMWFCHRR LKDRKPPPVK QPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH  120
PVDVRPGVAV ARIGLNLPSM NKFYESQQSI AELRAIALVE AQLGEALRED GPILGMEFDP  180
LPPGAFGAPI GVTAVSDDEK KTGQFFEGSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK  240
SDERERDTSS YQYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLNIVAQQ  300
SRRSHNLLSS MGEHDNSLCR SSLVNISMNP LYGTHSTSHP EFTSVLSDKR VVRGNNVVWI  360
EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREEQI RKEMERHDRE RRREEERLLR  420
EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ  480
MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKGMRPNF PPESVQMRRP  540
FPDHPWIESE ANVGNLLMAW KFLVTFADVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL  600
KCIIKDVEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE  660
ILRQLALSGG FGPQQRKGGN AEPAHHDENE QGNDVADIIS NLRNGLAAEK AVAIMQERGF  720
SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA  780
ALSRDSKLFE RTAPSTYCVR SPYRKDPGDA DAILSTARER IRTFKSGILD GDDAERDDGS  840
EVDVPEDAEV HDLGTGGNLT KQHQSPEVCP LDEMTSVASG NGCNEISDIC KVGMANGGPY  900
TAILDIKGDH GEPWVQGLTE GEYSDLSVEE RLNALCSLIG VALEGNSMRT VLEERLEAAN  960
SLKKQMLAEA QIDKRRVKEE YVLQIHDSSS VGNKSEFKTM SSLDATRLSA ILNIGEENRE  1020
GPLDTGFQQE DCHSSHNNCP SEGLQVQDVL VEADNSQLQH SVVAVEKSRS QVKSYIGHKA  1080
EEMYVYRSLP LGQDRRRNRY WQFTSSASRN EPGNGRIFVE LHNGSWRLID SAKGFDALLA  1140
SLDVRGIRES HLHLMLQKLE KSFKTATRGN ILQDSQRTGE DAAGQHCNAH NNGPSNTVYA  1200
DNHDGFESST SFRSEAEETG SDTTESLKRY LDFESWMRRE CFSLSVLSAN KHGKKQGTQL  1260
LENIGLSWCS SSPLRIRLLK MLLTLIEVSI PGEAFQPSWT DFERKTWSSK LLSSSSAEDV  1320
LQILTLLENG IKRDFMWSNY ETTYELLACF NPTGSYTCHS SFPETVPVLP WIPLTTAAVA  1380
LRLLEFEASL SYILQQKAES QAQGSMDIKP LSDSATAVIS NEHVKEANLI YGGVGPSSSD  1440
YGQLDSKRGH GRIRGGKSHK RTNSMRPVSD KSTGNNRNNR KILRQVLMWE DGQMEEQGGF  1500
RRGRRSARSR QKSGRKIKFG SEGGHPEETI NETSKLSLDN SHEWNDDQNI RMLQRSDGSP  1560
NSSDRLISID NSGRVEYDDM LVDDRARSWQ AGYLPTSRSY KMDEDREDDL SAGERGNTMD  1620
KEYKEYDLSD GGRGNVMDEE RDLYVEHYTD GEYNEESNRN LEDNMELQSA SSDYSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	23	KKPPPPVEATKTKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein