PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952703.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 499aa MW: 56137.9 Da PI: 6.4047

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952703.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.9	1.4e-10	441	496	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 r+rW+teE+e l+++v+++ + Wk+I + ++Rt+ ++k++w++ XP_022952703.1 441 RMRWSTEEEEMLKEGVHRFSSTdsknvPWKKILEFGHhvfdNTRTPVDLKDKWRNI 496 89*****************************988899*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MCRKTVRTKS RRGGKSRLSR RSAASTPPPM VSPSFSDQDA PNAEGNTLND GFASCKDVLN 60 AEDNTVHEAS RNETNDVLDN IDCFQKDTCI RCDKSGDLLV CTEIGCPIAL HELCMSCEPS 120 YDEEGRFYCP YCSYKRALVR VNESRRNAMV AKRALSNFVD TRMVGGGNLL QIGEAGKKKA 180 SNVSTRGVDA NQPNHGSHWG NDSSRDQDTQ IEQNQSNEKE DHARIARDVQ ATSMVRVIGE 240 NHDGPIVSNI SKGIYSTPEV QPCEDSMNEE ETREADTLGT HQVESLEDED GEMMDEENLR 300 STDNLQDDET AKDRGQSATT SPHRDGETAQ EPQEQDKDDG GEQIHPNNEG MLEDTGLASG 360 NNDLKDETIV KKKRFKIKAN RRSNRQKFNS PRKSLRLQTS NPGKDHATKI EKVSASRNLR 420 MQPASRNQFK SFDFHGGKRK RMRWSTEEEE MLKEGVHRFS STDSKNVPWK KILEFGHHVF 480 DNTRTPVDLK DKWRNILAK

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MCRKTVRTKS RRGGKSRLSR RSAASTPPPM VSPSFSDQDA PNAEGNTLND GFASCKDVLN  60
AEDNTVHEAS RNETNDVLDN IDCFQKDTCI RCDKSGDLLV CTEIGCPIAL HELCMSCEPS  120
YDEEGRFYCP YCSYKRALVR VNESRRNAMV AKRALSNFVD TRMVGGGNLL QIGEAGKKKA  180
SNVSTRGVDA NQPNHGSHWG NDSSRDQDTQ IEQNQSNEKE DHARIARDVQ ATSMVRVIGE  240
NHDGPIVSNI SKGIYSTPEV QPCEDSMNEE ETREADTLGT HQVESLEDED GEMMDEENLR  300
STDNLQDDET AKDRGQSATT SPHRDGETAQ EPQEQDKDDG GEQIHPNNEG MLEDTGLASG  360
NNDLKDETIV KKKRFKIKAN RRSNRQKFNS PRKSLRLQTS NPGKDHATKI EKVSASRNLR  420
MQPASRNQFK SFDFHGGKRK RMRWSTEEEE MLKEGVHRFS STDSKNVPWK KILEFGHHVF  480
DNTRTPVDLK DKWRNILAK