PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022952268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 314aa MW: 36296.9 Da PI: 7.3842 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.6 | 8.8e-52 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhP+deelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkdk++ XP_022952268.1 6 LPPGFRFHPRDEELVGYYLKRKVEGLPIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKIN 99 79****************************.99**************95344555788************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +++g +ktLvf++grap+g + dWvmheyrl XP_022952268.1 100 C-QFSVMGYRKTLVFHRGRAPSGDRMDWVMHEYRL 133 *.8889***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MGSGSLPPGF RFHPRDEELV GYYLKRKVEG LPIELEVIPV IDLYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDKKINC QFSVMGYRKT LVFHRGRAPS 120 GDRMDWVMHE YRLCDEFSHG TPNFKGAFAL CRIVKKNDNP REPKGNVVGN GRDSEDSTST 180 KLVVSNEFSN ISKDDSSQTN FLTDKSRLSS PMTSSYDTNM MSWCSMSIME TNREKVWISP 240 DLILDSSKQD YTEMQGAMSI CFPWFDYSGS TIPWPSYEYS NYTGNYIELE DNPNQIGGCI 300 PPYSTHLNRY PNFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 3e-99 | NAC family protein |