PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951900.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Nin-like
Protein Properties Length: 370aa    MW: 41984 Da    PI: 4.7372
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951900.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK70.52.4e-22279327351
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                      +++++d+ +y +lpi +A+k+L+vc TvLK+iCR+ G++RWP+Rki+s
  XP_022951900.1 279 GRMTVNDVWEYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRS 327
                     678999*****************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MAIDPRNTMG AFEPDQDPYD SSINANILNF ANDQNPTLDD LQSTAEQPVA AARDSHGGRT  60
SAFQNMGMVE LLTHFSFGGQ YDSEAGPSNA GEAASNFEED DDIQIPSEVK SKLLAIWPVT  120
PVPFLCSCCQ VLREFLHSNG VNSRKLEIHG RLGMICHAIL EHKPIVNVDN ISPQYQMFDF  180
CDKSFEEIKQ FLLQYCLKQI LEDYNMIPDP MSNFYDALCV GIDWFENLNT TDAFFQQSPD  240
NSEDEDMDQS VPGFQNDTPE PQGQPSRRPS LAAQRQRTGR MTVNDVWEYL HLPISEASKK  300
LNVCNTVLKK ICRRSGLSRW PYRKIRSYER RIAALKTTIN SSYGDTRTRA EAEIQRVQKE  360
LSDFCARIRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.16e-13Nin-like family protein