PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022951899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 346aa MW: 38774.7 Da PI: 10.0228 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 391.1 | 1.6e-119 | 1 | 346 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 mdd+g+re r+k+ +y++a + + +++ +q+m+++aerda+i+ernlalsekkaa+aerdma+lqrd+a+aern+al+erdn++++l+++e XP_022951899.1 1 MDDSGHREngRHKAeQYKSAqgQWMMQHQpsMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAYLQRDAAIAERNNALLERDNAIATLQYRE 95 9*****999*****9***6656445545422469************************************************************* PP GAGA_bind 89 nsla...salpvgvqvlsgtksidslqqlse.........pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171 nsl+ ++p+g+q+ +g+k+i++ qq+++ p++++s ++ re + ++a p+++++ ++++k++++kr ++ ++ ++++kk XP_022951899.1 96 NSLTnnnLSCPPGCQIARGVKHIHHPQQQQQqqqhthhhvPHMNESNYNSRELHANDACPVSSQVASESTKARRNKRTKEDNKT---VTAPNKKV 187 *99877789***************999855557788999999*******************99887777666666444333333...33444444 PP GAGA_bind 172 ekskkkvkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtt 237 +k +kvk+e +d + sk+++k +dl+ln+v++Dest+P+P+CsCtG+ rqCYkWGnGGWqSaCCtt XP_022951899.1 188 SKAPRKVKREAEDLNkirlgksqewkdgigivsggddlnkhlvvSKSDWKGQDLGLNQVAFDESTMPAPICSCTGVIRQCYKWGNGGWQSACCTT 282 455566666666633477899999*********************************************************************** PP GAGA_bind 238 tiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 t+S+yPLP+++++r+aR++grKmS++af+klL++L+aeG+dls pvDLk+hWAkHGtn+++ti+ XP_022951899.1 283 TVSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLTAEGHDLSAPVDLKNHWAKHGTNRYITIK 346 ***************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MDDSGHRENG RHKAEQYKSA QGQWMMQHQP SMKQIMAIMA ERDAAIQERN LALSEKKAAI 60 AERDMAYLQR DAAIAERNNA LLERDNAIAT LQYRENSLTN NNLSCPPGCQ IARGVKHIHH 120 PQQQQQQQQH THHHVPHMNE SNYNSRELHA NDACPVSSQV ASESTKARRN KRTKEDNKTV 180 TAPNKKVSKA PRKVKREAED LNKIRLGKSQ EWKDGIGIVS GGDDLNKHLV VSKSDWKGQD 240 LGLNQVAFDE STMPAPICSC TGVIRQCYKW GNGGWQSACC TTTVSMYPLP AVPNKRHARV 300 GGRKMSGSAF NKLLSRLTAE GHDLSAPVDL KNHWAKHGTN RYITIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.1 | 1e-157 | BBR-BPC family protein |