PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951896.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 346aa    MW: 38774.7 Da    PI: 10.0228
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951896.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind391.11.6e-11913461301
       GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd+g+re  r+k+ +y++a  + + +++   +q+m+++aerda+i+ernlalsekkaa+aerdma+lqrd+a+aern+al+erdn++++l+++e
  XP_022951896.1   1 MDDSGHREngRHKAeQYKSAqgQWMMQHQpsMKQIMAIMAERDAAIQERNLALSEKKAAIAERDMAYLQRDAAIAERNNALLERDNAIATLQYRE 95 
                     9*****999*****9***6656445545422469************************************************************* PP

       GAGA_bind  89 nsla...salpvgvqvlsgtksidslqqlse.........pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
                     nsl+    ++p+g+q+ +g+k+i++ qq+++         p++++s ++ re + ++a p+++++ ++++k++++kr ++ ++     ++++kk 
  XP_022951896.1  96 NSLTnnnLSCPPGCQIARGVKHIHHPQQQQQqqqhthhhvPHMNESNYNSRELHANDACPVSSQVASESTKARRNKRTKEDNKT---VTAPNKKV 187
                     *99877789***************999855557788999999*******************99887777666666444333333...33444444 PP

       GAGA_bind 172 ekskkkvkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtt 237
                     +k  +kvk+e +d +                             sk+++k +dl+ln+v++Dest+P+P+CsCtG+ rqCYkWGnGGWqSaCCtt
  XP_022951896.1 188 SKAPRKVKREAEDLNkirlgksqewkdgigivsggddlnkhlvvSKSDWKGQDLGLNQVAFDESTMPAPICSCTGVIRQCYKWGNGGWQSACCTT 282
                     455566666666633477899999*********************************************************************** PP

       GAGA_bind 238 tiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     t+S+yPLP+++++r+aR++grKmS++af+klL++L+aeG+dls pvDLk+hWAkHGtn+++ti+
  XP_022951896.1 283 TVSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLTAEGHDLSAPVDLKNHWAKHGTNRYITIK 346
                     ***************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MDDSGHRENG RHKAEQYKSA QGQWMMQHQP SMKQIMAIMA ERDAAIQERN LALSEKKAAI  60
AERDMAYLQR DAAIAERNNA LLERDNAIAT LQYRENSLTN NNLSCPPGCQ IARGVKHIHH  120
PQQQQQQQQH THHHVPHMNE SNYNSRELHA NDACPVSSQV ASESTKARRN KRTKEDNKTV  180
TAPNKKVSKA PRKVKREAED LNKIRLGKSQ EWKDGIGIVS GGDDLNKHLV VSKSDWKGQD  240
LGLNQVAFDE STMPAPICSC TGVIRQCYKW GNGGWQSACC TTTVSMYPLP AVPNKRHARV  300
GGRKMSGSAF NKLLSRLTAE GHDLSAPVDL KNHWAKHGTN RYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-157BBR-BPC family protein