PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022951800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 269aa MW: 30209.8 Da PI: 7.2074 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.7 | 4.6e-19 | 96 | 150 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q +Le+ F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_022951800.1 96 RKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 150 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 130.2 | 7.9e-42 | 96 | 185 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q+++LE+sF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_022951800.1 96 RKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 185 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MMSSKHDNLS LSLGLSFDSH YLQLNLRPSW NDHASSDRTS ENRTPPSPVD CEEEEEEAAV 60 SSPNSTVSTV SGKRSEPETN NGEDLDGDEE DAETSRKKLR LTKDQSAVLE DSFKEHNTLN 120 PKQKLALAKQ LGLRPRQVEV WFQNRRARTK LKQTEVDCEF LKRCCENLTE ENRRLQKEVQ 180 ELRALKLSPQ FYMHMAPPTT LTMCPSCERV AVPSSTSAPL NVTRMGPAQA QAQAQAQAQS 240 KALHSRPIHV NPWASAIPAR PFNALHPRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 95 | 101 | SRKKLRL |
2 | 145 | 153 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 1e-69 | HD-ZIP family protein |