PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951481.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 374aa    MW: 40571.7 Da    PI: 5.4101
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951481.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20167216255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_022951481.1 167 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 216
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MAALMDFYGC RDLQSYPVGG ELMEALEPFM KAASSSSSSS SFLPSFSPSS SSFVPDFSSS  60
FSSIQTESTS YPSDCSPPVA YSYSDGFSAN NLHGLEQSAS IGLNYLTPFQ IQQIQSQFGL  120
QTQIQPVWGH VNNQQELTKN QMNGVNLLGP KAIPMKHAGS PPKSTKLYRG VRQRHWGKWV  180
AEIRLPRNRT RLWLGTFDTA EEAALAYDKA AYKLRGDFAR LNFPQLKHHG SSVGGDFGEY  240
KPLHSAVDAK LDAICQTLAE SQKQGKSNRS ASSRKSKSSS ISSTVGSESQ APTVIDSDDD  300
QKASDVRSSG SEICCKAENS SSPVSAESDE SAGSSPLSDL TFPDPTDSPW EQPSESSMLQ  360
KYPSEIDWAS IFTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-58ERF family protein