PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022951239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 221aa MW: 25588.2 Da PI: 7.4348 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 86.2 | 4.8e-27 | 56 | 144 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ + ++s+++g+i r++ C+keg+ + + k r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+ XP_022951239.1 56 FYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 144 9**************************************999999989***************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MDLRDNSERC LLTVDADEGG SFESPAATEL IECHGDIILE PYEGMEFESE DAAKIFYDKY 60 ARQVGFVMRV MSCRRSEKDG RILARRLGCN KEGYCVSIRG KFGAVRKPRP STREGCKAMI 120 HVKYDKSGKW VITKFVKEHN HPLVVSPREA RQTMDEKDKQ IQELTTELRN KKRLCLTYQE 180 QLAAFMNIVE EHTDQLSRKV QNVVTNLKEF ESLEQELLHP R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-113 | FAR1 family protein |