PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951054.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 523aa MW: 57698.3 Da PI: 9.4374

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951054.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.4	2.7e-16	225	284	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022951054.1 225 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 284 78*****************988886678446***********************98 PP
2	AP2	46.3	1e-14	327	378	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022951054.1 327 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 378 689*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MNNKNKIKNM NMNMNMKSMN DHNNGWLGFY GIPDSSAAAA AAMHLKSDAP LRLMGPLSTS 60 QNQGMVPNSS PKLEDFLGGA TMADREHSLD LQNQEHHHIL IQNSHPYYSA LVPSDPQILP 120 IDENEIRSLR NWVSPPYYAA TPHNTLEQHI TGGGGGSASI AGMSSGELQS LSLSMSPGSQ 180 STSFTAPGQI SSTAAVETKK RGPGKLCHKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE 240 AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQTEL 300 EEMKNMSRQE YVAHLRRKSS GFSRGASVFR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 360 TQEEAAEAYD IAAIKFRGVN AVTNFDICKY DVERIMASST LLAGEQARRN KEVDTTVAPN 420 NNGTNSNSTT DWKTALYNNQ QQQSIAALGG YRNASFTMAL QDLIGTESLT SASQFSNSSS 480 LVTREGSPEK TKVAAVNGVS SWYPWPAAIA MAHLPVFAAW NDT

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MNNKNKIKNM NMNMNMKSMN DHNNGWLGFY GIPDSSAAAA AAMHLKSDAP LRLMGPLSTS  60
QNQGMVPNSS PKLEDFLGGA TMADREHSLD LQNQEHHHIL IQNSHPYYSA LVPSDPQILP  120
IDENEIRSLR NWVSPPYYAA TPHNTLEQHI TGGGGGSASI AGMSSGELQS LSLSMSPGSQ  180
STSFTAPGQI SSTAAVETKK RGPGKLCHKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE  240
AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQTEL  300
EEMKNMSRQE YVAHLRRKSS GFSRGASVFR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS  360
TQEEAAEAYD IAAIKFRGVN AVTNFDICKY DVERIMASST LLAGEQARRN KEVDTTVAPN  420
NNGTNSNSTT DWKTALYNNQ QQQSIAALGG YRNASFTMAL QDLIGTESLT SASQFSNSSS  480
LVTREGSPEK TKVAAVNGVS SWYPWPAAIA MAHLPVFAAW NDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-128	AP2 family protein