PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950965.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 346aa    MW: 39387.4 Da    PI: 4.6408
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950965.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.1e-12188231654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A++Y+k+L
  XP_022950965.1 188 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIDYMKEL 231
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MPSRYFRKTA IREEERKLEA EREMELDEHG FLEELMALRR EANWDAIPTE ITDLNAWAFD  60
YCFDQNISNV NPNSSSEPLS TQNLDEFYHP LANEFSVPEM ADSAYAAMEV AAPLPFQAER  120
PNVEGEEEEE ELGFLANEIQ NMEAVHVQSA CKAEPNQSPE LPVFNIGTCA LERKNGPKKL  180
QGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTAI LADAIDYMKE LLEKIGNLQR  240
EMDRTNQTTR NSFHDTKPSE FVVRNSPKFE VESRNGNTRI EIYCAAKPGL LLSTVNTIEA  300
LGLEIQHCVI SCFNDFALQA TCSQELKPEE LKEALFRNAG YGGSCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191198ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-73bHLH family protein