PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950827.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 510aa    MW: 58062.4 Da    PI: 9.3094
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950827.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.3e-187100199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                     ffk+l++ +   +  l++pkkf++++g+    s  ++l+ ++g +W+v l++  + g+++l+kGW +F++   L+ g  +vF+l+gr s+f   v
  XP_022950827.1   7 FFKILLHRNLEDQ-KLMIPKKFVKKYGK--LLSSAVILKLPDGMKWKVGLTMAAN-GAVWLQKGWHKFANHYSLEFGSLLVFRLEGRsSSF--EV 95 
                     7888866555555.5***********84..47889***************65444.469**************************998888..99 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++f+ 
  XP_022950827.1  96 TIFDP 100
                     99885 PP
2B355.69.5e-18152243194
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f+ vl +s+v  + ++v+p kfa+++  +k  s    +++ +gr+W + ++++++ ++  + ++GWk+Fv++n LkegD+v F+++++ +f l+ 
  XP_022950827.1 152 FQVVLNQSNVCGRYNMVFPAKFARSYLCEK--SGNFNVQTANGRKWPLLYKWSGSVDKfAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF-LFT 243
                     778899999999999***********5443..4479999*************88888888999*********************9986666.444 PP
3B348.91.2e-15257338187
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                     ffkv ++  + k+++l +p  f +eh +++ +s  ++l++  +++W v+l  +++ g + +++GW++F  +ngLk+gD+++F+++g+
  XP_022950827.1 257 FFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKS--VKLQT-GNKEWMVTL--KQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGS 338
                     899999999*****************9887665..77655.78*******..88888899***********************8775 PP
4B334.83e-11347436198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv+  +d ++++ ++ p   +++ +g+   + + +++d+ g+sW+++l  +k ++ +++++GW  Fv+   Lk  Df+ F++dg+ +f   v 
  XP_022950827.1 347 FFKVF-IPDFGSLH-MSRPPASVKHLNGS--FPEKAIIKDPMGKSWRITL--EKLDDLVYFKNGWPAFVDYYFLKYEDFLAFQYDGHCTF--DVE 433
                     67777.44777777.77788888655666..566899*************..***999***************************98888..787 PP

                     EE- CS
              B3  96 vfr 98 
                     +f 
  XP_022950827.1 434 IFG 436
                     775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MASSPQFFKI LLHRNLEDQK LMIPKKFVKK YGKLLSSAVI LKLPDGMKWK VGLTMAANGA  60
VWLQKGWHKF ANHYSLEFGS LLVFRLEGRS SSFEVTIFDP SGLESEYSSF HACDSITESE  120
EDDDSVSDSD EEDYEIGVSR RRRKSATEKP GFQVVLNQSN VCGRYNMVFP AKFARSYLCE  180
KSGNFNVQTA NGRKWPLLYK WSGSVDKFAY VSSGWKRFVQ ENLLKEGDVV FFEMIKKGRF  240
LFTKLQDKNT ASTRNPFFKV DIHYKSYKNR ILNIPLAFGK EHFSPEMKSV KLQTGNKEWM  300
VTLKQYEGCM RFSGGWRKFY GENGLKDGDT CLFEMHGSTS AASSLEFFKV FIPDFGSLHM  360
SRPPASVKHL NGSFPEKAII KDPMGKSWRI TLEKLDDLVY FKNGWPAFVD YYFLKYEDFL  420
AFQYDGHCTF DVEIFGTNGC KKAVAAKAAS CIPILEAVAA DAANSVPILK VKEDAKHSIS  480
SKRTRLQVGS VYFWTYGEGS EHLVETKHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-21B3 family protein