PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022950638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25837 Da PI: 6.5589 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1.1e-08 | 133 | 174 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r RR+ri +++ L++l+P +K++ a++L +A++Y+k L XP_022950638.1 133 AARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 174 6799*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEPHHLSNPS PHLHHSAMED HHILHRHHHV HVHDPDPDPD PDPDPDSIWS SLLPFHLPDP 60 HQQFPSSSTH LLISYATPSS RVDNDEEPEE ELGAMKEMMY KIAAMQPVDI DPSTIRKPKR 120 RNVRISDDPQ SIAARLRRER ISEKIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL 180 LQSSDQPQQP STDGGAAAGG WPLTFHKADG SASSSTSMET TPAIITPSGW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 140 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00120.1 | 5e-47 | bHLH family protein |