PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950474.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 468aa MW: 52390.4 Da PI: 7.0978

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950474.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	301	338	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_022950474.1 301 FEHflHPYPTDTDKLMLANQTGLSRSQVSNWFINARVR 338 564459******************************88 PP
2	BELL	90.4	1.8e-29	178	247	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e +++k++L+++l+eV++rYk y++q+q+v+ Fe v glg+a+pY++lA ka+ +hFr Lk+aia+q+ XP_022950474.1 178 IESRRRKSRLITMLDEVYRRYKLYYQQMQAVVTTFEYVGGLGNAAPYVNLAVKAMFKHFRFLKNAIADQL 247 58899***************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MAEGFELYHV PQQSRRDKLR VGVGSGATNN PNFLPLYHHH GGGGGGGDDD DPSSLISPDF 60 DFHQNPSFNL HNHNHYPPTP TPTPPAAFAT AAHHLPPLLP DQQPPLSLDL NLQHRYASSP 120 APLLTSKFLK PAQQLLHDLF HYADKFPPDS PLVDPLLHSL GADIPTAALH HHPTDDGIES 180 RRRKSRLITM LDEVYRRYKL YYQQMQAVVT TFEYVGGLGN AAPYVNLAVK AMFKHFRFLK 240 NAIADQLQLN KQHQQPPPPY NPYCQRSIHN NSGGFVDHQP VWRPQRGLPE SAVTVLRAWL 300 FEHFLHPYPT DTDKLMLANQ TGLSRSQVSN WFINARVRLW KPMVEEIHML ETREAQKSQH 360 RDANNGTPLN NNNNDDHLSS TNQSLNNASS SNHDQHPLHL SNSNFFPTHH PHPPAGATTM 420 GAGNVSLTLG LHQNHGGITL TEPFPINAAQ HFNLGLEANG EGFVNEWF

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MAEGFELYHV PQQSRRDKLR VGVGSGATNN PNFLPLYHHH GGGGGGGDDD DPSSLISPDF  60
DFHQNPSFNL HNHNHYPPTP TPTPPAAFAT AAHHLPPLLP DQQPPLSLDL NLQHRYASSP  120
APLLTSKFLK PAQQLLHDLF HYADKFPPDS PLVDPLLHSL GADIPTAALH HHPTDDGIES  180
RRRKSRLITM LDEVYRRYKL YYQQMQAVVT TFEYVGGLGN AAPYVNLAVK AMFKHFRFLK  240
NAIADQLQLN KQHQQPPPPY NPYCQRSIHN NSGGFVDHQP VWRPQRGLPE SAVTVLRAWL  300
FEHFLHPYPT DTDKLMLANQ TGLSRSQVSN WFINARVRLW KPMVEEIHML ETREAQKSQH  360
RDANNGTPLN NNNNDDHLSS TNQSLNNASS SNHDQHPLHL SNSNFFPTHH PHPPAGATTM  420
GAGNVSLTLG LHQNHGGITL TEPFPINAAQ HFNLGLEANG EGFVNEWF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	185	SRRRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	5e-73	TALE family protein