PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022950435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 851aa MW: 92474.9 Da PI: 6.7503 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 422.2 | 4.3e-129 | 466 | 825 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +lLl+cAeavs+++le+a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y+alpps ++++s++ ++a+++f+ +sP++kfsh+ XP_022950435.1 466 LTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPSLMPHTHSQKIASAFQVFNGISPFVKFSHF 560 579******************************************************************************************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191 taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g s++ le+tg+rL++fAe+lg+pf+f + va+++ +l+l XP_022950435.1 561 TANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SQQVLEATGKRLTEFAEKLGLPFDFFP-VADKIGNLDL 650 *****************************************************....99*************************.7********* PP GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286 e+L+v+++Ea+aV+++ h+l++ ++s ++ +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl +++++eseer+ vE XP_022950435.1 651 ERLNVSKREAVAVHWMQ--HSLYEVTGSDSN----TLWLLQRLAPKVVTVVEQDLSH-TGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVE 738 ****************9..999988888888....**********************.889********************************** PP GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++ll+rei+nv+a g +r+ + + +++Wre+l+++GFk ++l +aa+qa lll +++sdgy++ e++g+l lgWkd L+++SaW+ XP_022950435.1 739 QQLLSREIRNVLAVGGPSRTGEVK-FQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDHGTLKLGWKDLCLLTASAWK 825 ******************988887.**************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 851 aa Download sequence |
MAAYALLGDS TGRVNGGFDD SPLTSASTNS NGSEERNHQQ TVQVQVIQSR KMVRKRIASE 60 MEIDGGGVTA SVHSRLSRRS LGSDRPFGCG EIKGNVNYCS SSNPSHGGNH STVHNLTALT 120 SGVIEGTNLS NPPSASDATA SSTTSNNNNN NNATLLDSTL PVLRPQPHHH LQNPAVCGFS 180 GLPLFPPESN HHHKLNTRSN PFPLPNPSQI LLHNPPTTAT SSIIAAASSP MDDSSATAWI 240 DGIIKDLIHS STAISIPQLI QNVREIIYPC NPNLANLLEF RLRTLTEPSV PNFVAEDHRL 300 RKSALPLPAP VAGLGLQQRQ FNQEQHEQEH DCSGLKLNLD SSSLHNFSTF PSHPPFHEPY 360 LHWGATTPPV PTPSGEDALQ RLPGHHQLNL SSVTPSSLVS LNHVPSKPQS EQQNSCPVNV 420 KAAVAQPPPA AAPQPSNNPS ATALLIREIK EEMRQQKRDE EGLHLLTLLL QCAEAVSADN 480 LEEANKMLLE ISELSTPFGT SAQRVAAYFS EAMSARLVSS CLGIYAALPP SLMPHTHSQK 540 IASAFQVFNG ISPFVKFSHF TANQAIQEAF EREERVHIID LDIMQGLQWP GLFHILASRP 600 GGPPYVRLTG LGTSQQVLEA TGKRLTEFAE KLGLPFDFFP VADKIGNLDL ERLNVSKREA 660 VAVHWMQHSL YEVTGSDSNT LWLLQRLAPK VVTVVEQDLS HTGSFLGRFV EAIHYYSALF 720 DSLGVSYGEE SEERHLVEQQ LLSREIRNVL AVGGPSRTGE VKFQNWREKL QQSGFKGISL 780 AGNAATQATL LLGMFPSDGY TLVEDHGTLK LGWKDLCLLT ASAWKPPFHH HAAAAAAATA 840 PATNNNHIPR Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 0.0 | GRAS family protein |