PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950356.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 220aa    MW: 23440.7 Da    PI: 4.588
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950356.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.00011112133223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC  Cgk F ++     H+r+H
  XP_022950356.1 112 KCATCGKAFGSWKAVFGHLRSH 133
                     7*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MCRNEVIGDP LVANLMERDH NESSPENSTS HGGGGGYTPP MTLTNTPDDV VVSSSFPVPP  60
TMTFDMAPYS SPEASGRKRG RAEQHVGGSS CGSGQKGKKK GELIDPPSTD PKCATCGKAF  120
GSWKAVFGHL RSHPERDYRG AFPPPKVWEE MLQQEARQGS SGTTIGCSVG GEMGMSPPSG  180
RGIGIDLNDP DEQGARREGF PFDLNMPAPE NEEDDDNNES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17682GRKRGRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35610.16e-14C2H2 family protein