PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950313.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 457aa MW: 50754.1 Da PI: 4.6696

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950313.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.8	6.9e-43	6	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrF Pt el ++yLkkkv ++k+ vi+e+d+yk+ePwdLp k ++++++ +wyfF++ ++k a+g r nr+t+ gyWk+tgkd++v XP_022950313.1 6 LAPGFRFYPTHVELAMYYLKKKVMREKFLK-GVISELDVYKYEPWDLPdKaCLRSRDLKWYFFCPIKRKCASGARVNRTTQFGYWKSTGKDRPVA 99 579**********************766.89**********96347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++++vg ktL+f++g+++kg tdWvmheyrle XP_022950313.1 100 H-NNTNVGRIKTLTFFSGKSSKGDPTDWVMHEYRLE 134 .9999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MTAISLAPGF RFYPTHVELA MYYLKKKVMR EKFLKGVISE LDVYKYEPWD LPDKACLRSR 60 DLKWYFFCPI KRKCASGARV NRTTQFGYWK STGKDRPVAH NNTNVGRIKT LTFFSGKSSK 120 GDPTDWVMHE YRLEEKYLSS KNVSQDAYVL CVIFQKDGPG PRNGAQYGAP FNEEDWDEDG 180 VEEMGSSEVD LSSGLSVPSI KEPLNSFAPY TSVTPSNVFG CSSASCISEN LASTSKEIPQ 240 NISGGIAPVE IPHNLDSADD LFTIEDFYPE DGNLNLIVDD GFQATVPASK HTDQNDPIFG 300 GLGYLDAWYP LNANITEDGN AYVTGNGAIY SSEQTFPIYN EAMFSSDQRP YLELNDLNAP 360 LSDTYRDTQM SNAVYNCSSV IEQPCFHFSS FGAANQHVPS CQYPSQHHSS DQICHPTDLG 420 YPDANMSASS QENIHSNSNG GSNGYKPPRL DHDANLP

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MTAISLAPGF RFYPTHVELA MYYLKKKVMR EKFLKGVISE LDVYKYEPWD LPDKACLRSR  60
DLKWYFFCPI KRKCASGARV NRTTQFGYWK STGKDRPVAH NNTNVGRIKT LTFFSGKSSK  120
GDPTDWVMHE YRLEEKYLSS KNVSQDAYVL CVIFQKDGPG PRNGAQYGAP FNEEDWDEDG  180
VEEMGSSEVD LSSGLSVPSI KEPLNSFAPY TSVTPSNVFG CSSASCISEN LASTSKEIPQ  240
NISGGIAPVE IPHNLDSADD LFTIEDFYPE DGNLNLIVDD GFQATVPASK HTDQNDPIFG  300
GLGYLDAWYP LNANITEDGN AYVTGNGAIY SSEQTFPIYN EAMFSSDQRP YLELNDLNAP  360
LSDTYRDTQM SNAVYNCSSV IEQPCFHFSS FGAANQHVPS CQYPSQHHSS DQICHPTDLG  420
YPDANMSASS QENIHSNSNG GSNGYKPPRL DHDANLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	6e-85	NAC family protein