PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949881.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 549aa MW: 60905.7 Da PI: 6.5053 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 416.7 | 2e-127 | 178 | 549 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l+++L++cA+a++++dl+ a+ ++ l +++s +gdp qRl ay++e+L+arl rs+s +ykal+++e + sse +++++++++++P++kf++ XP_022949881.1 178 LRDTLIHCAQAIHDSDLNVATLFMDVLGKMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPT---SSELMSYMSVLFQICPYFKFAY 269 5789*****************************************************************9...9999****************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187 aN I ea+ +e +HiiDf+i qG Q+++L++ La+Rp+gpp lRiTgv++++s+ + l+ +g++La++A++ g+pf+f++ +a + XP_022949881.1 270 TSANAIIWEAMVNEPIIHIIDFQIAQGSQYIPLIHDLANRPGGPPvLLRITGVDDSQSShaRGGGLQIVGQKLAQLAQSKGIPFQFHA-AAMSGC 363 *****************************************9999789*******9988889999***********************.899999 PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282 ++e ++Lr++pgEalaVn+ + lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n+++Fl rfle+l+yy+a+f+s+++ +r++++r XP_022949881.1 364 EVERSNLRIRPGEALAVNFPYVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLIRFLETLDYYTAMFESIDVARSRDDKQR 458 *********************************************************************************************** PP GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 i E+++++r+ivn+vaceg+er+erhe l+kWr+r+++aGF+++pls+++ +k llr ++++ yr++e +gsl+lgWk+r++ + SaWr XP_022949881.1 459 IRAEQHCVARDIVNMVACEGFERIERHELLGKWRMRMKMAGFTSYPLSSSVSGAVKNLLRDFNGN-YRLQEVDGSLYLGWKNRAMATSSAWR 549 ***************************************************************77.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MRASQNSQAS SGIHEMHHQS VQKIDPYYLS HLHILENNVS PDASSQGNSV NFSSFKDQFF 60 TLESFPATAD LSACNSPSAV SGLSSRSPFS PQGSQSCSSD QPHSFDNTCG SPQSGCSVTD 120 DDNELKYKLK ELEISLLGPE SDILDSCYCS FRGGAHQDAS VARWNWNQVA EMIPGLNLRD 180 TLIHCAQAIH DSDLNVATLF MDVLGKMVSV SGDPAQRLGA YLLEGLRARL ERSGSAIYKA 240 LKCEEPTSSE LMSYMSVLFQ ICPYFKFAYT SANAIIWEAM VNEPIIHIID FQIAQGSQYI 300 PLIHDLANRP GGPPVLLRIT GVDDSQSSHA RGGGLQIVGQ KLAQLAQSKG IPFQFHAAAM 360 SGCEVERSNL RIRPGEALAV NFPYVLHHMP DESVSTQNHR DRLLRLVKSL SPKVVTIVEQ 420 ESNTNTSPFL IRFLETLDYY TAMFESIDVA RSRDDKQRIR AEQHCVARDI VNMVACEGFE 480 RIERHELLGK WRMRMKMAGF TSYPLSSSVS GAVKNLLRDF NGNYRLQEVD GSLYLGWKNR 540 AMATSSAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17230.1 | 0.0 | GRAS family protein |