PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 155aa MW: 17398.1 Da PI: 9.7829 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.5 | 4.8e-05 | 84 | 106 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ Fs+ L H+r+H XP_022949830.1 84 HECGLCGQEFSSGQALGGHMRRH 106 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MAAKRIRQEF EVSDMAKSPM FISYGIESSN PIIPFQNASV FDCKTCNRHF SSFQALGGHR 60 ASHKRPRTTA EDPKEPVDSK HKMHECGLCG QEFSSGQALG GHMRRHRVTA VPEKIPVLKR 120 SGSRRIMCLD LNLTPLENDL KMLFGKMTPT VDLVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 2e-42 | C2H2 family protein |