PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022949704.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 900aa MW: 99411.5 Da PI: 6.7207

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022949704.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.1	3.9e-19	349	448	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ +++++e+ l+++d +g++W +++++ +++s++yvl+ G +a +L++gD+v+F++ + e++ XP_022949704.1 349 FEKMLSASDAGRIGRLVLPKKCAEAYfpSISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQAMQLQAGDTVTFSRLE-PEGK 441 89************************666677788***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022949704.1 442 LVMGFRK 448 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MSSAVTTASS SSSPISSRPC HNSDCKELRP ERSRKGWRLR TGDFAELCDR CASAYEEGRF 60 CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPAWPQ 120 TLLFHSAFSD RLKDLSVKNW SQLAGSGPVP WRQAPSMFNS SLPSGELHHR PPYEVDISAA 180 LNKLNTSERL PVSIEKRKND DFSERFLNGS LMQCGQDICE NGTAGGIKCE DKPSSCSTIP 240 QQSSFVKEDS STTQYGLNVP YAPPNEPSAR SRISGTHLRS TSLSPLPKQI HTNLQNGADS 300 SNEPQSRNGR PRGDSRGKNY LLPRYWPRFT DQELQQISVD SNSVITPLFE KMLSASDAGR 360 IGRLVLPKKC AEAYFPSISQ PEGLPLKVQD AKGKEWIFQF RFWPNNNSRM YVLEGVTPCI 420 QAMQLQAGDT VTFSRLEPEG KLVMGFRKAS AAADQENEAK KTKNGALVHG DVSNMKVKAE 480 LADPNSWTKV DKSGYIAKEV LGAKPSISRK RKSSTLGSKS KRLRIENEDM IELKITWEEA 540 QGLLRAPPNQ VPNVLVIEGF EFEEYEEAPV LGKPTIIPPD NTGERIQWNQ CEDCLKWRKL 600 PASAVLPSKW TCSDNSWDPE RSFCSAAQEL STEQLEELLS PGDSAAPVKK ATKLEPDNVE 660 ALEGLDTLAN LAILGEGEVS QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK QTCTCNVCLT 720 VKRRFQTLMQ RREKKQSVKE AETIRQRQQF QDEMFLDRSM DDESLTCSNT STSKLIEEGK 780 MNDDSDEDPN RNKPSTSPFK GQIDLNMQPE REDELSPGSD SGSMMKNLQD TGDRFFEQQR 840 LNSGGTGSSS SDPLEPGGER EHRGENISSV IDLSSINVDA DKGQPATVSF NASASMPSTG

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MSSAVTTASS SSSPISSRPC HNSDCKELRP ERSRKGWRLR TGDFAELCDR CASAYEEGRF  60
CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPAWPQ  120
TLLFHSAFSD RLKDLSVKNW SQLAGSGPVP WRQAPSMFNS SLPSGELHHR PPYEVDISAA  180
LNKLNTSERL PVSIEKRKND DFSERFLNGS LMQCGQDICE NGTAGGIKCE DKPSSCSTIP  240
QQSSFVKEDS STTQYGLNVP YAPPNEPSAR SRISGTHLRS TSLSPLPKQI HTNLQNGADS  300
SNEPQSRNGR PRGDSRGKNY LLPRYWPRFT DQELQQISVD SNSVITPLFE KMLSASDAGR  360
IGRLVLPKKC AEAYFPSISQ PEGLPLKVQD AKGKEWIFQF RFWPNNNSRM YVLEGVTPCI  420
QAMQLQAGDT VTFSRLEPEG KLVMGFRKAS AAADQENEAK KTKNGALVHG DVSNMKVKAE  480
LADPNSWTKV DKSGYIAKEV LGAKPSISRK RKSSTLGSKS KRLRIENEDM IELKITWEEA  540
QGLLRAPPNQ VPNVLVIEGF EFEEYEEAPV LGKPTIIPPD NTGERIQWNQ CEDCLKWRKL  600
PASAVLPSKW TCSDNSWDPE RSFCSAAQEL STEQLEELLS PGDSAAPVKK ATKLEPDNVE  660
ALEGLDTLAN LAILGEGEVS QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK QTCTCNVCLT  720
VKRRFQTLMQ RREKKQSVKE AETIRQRQQF QDEMFLDRSM DDESLTCSNT STSKLIEEGK  780
MNDDSDEDPN RNKPSTSPFK GQIDLNMQPE REDELSPGSD SGSMMKNLQD TGDRFFEQQR  840
LNSGGTGSSS SDPLEPGGER EHRGENISSV IDLSSINVDA DKGQPATVSF NASASMPSTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	508	513	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-141	B3 family protein