PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 369aa MW: 41081.7 Da PI: 6.4999 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.8 | 2.3e-07 | 144 | 165 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_022949681.1 144 FCEICGKGFKRDANLRMHMRAH 165 6*******************99 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00055 | 231 | 254 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 ++C+ C+ ksFs +Lk+H++ + XP_022949681.1 231 FSCNRCNkKSFSVMADLKSHLKHC 254 89*******************977 PP | |||||||
3 | zf-C2H2 | 11.3 | 0.0011 | 263 | 278 | 6 | 21 |
TTEEESSHHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHir 21 Cg++Fsrk+ L H+ XP_022949681.1 263 CGTTFSRKDKLFGHMA 278 **************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MNHPTSSMEF SGDPLPMSMI GNGGPLVPLQ NLSKIRSRMD AVQIFLSDNI DREVRISNRQ 60 MDAVSSEIAT AIQQIIVNGA ALLTCAREET PSTLDLTALT TLTHPNPVVE KSMAELKVEG 120 DEFEPDREIV ELDAMELLAE HIHFCEICGK GFKRDANLRM HMRAHGNQFK TPEALAKPLD 180 IVDANGRAKQ SRFSCPYDGC PRNKMHKKFR ALKSLICVKN HFKRSHCPKM FSCNRCNKKS 240 FSVMADLKSH LKHCGESKWR CSCGTTFSRK DKLFGHMALF EGHMPAVVDD DDGKGKTSVT 300 AATPETDEDG DSNRISKDVN FPNAWNGSDD GCFESFLDGF GSIENHCLQE VLGLPCNFDS 360 ESEWKICGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.3 | 1e-77 | C2H2 family protein |