PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 341aa MW: 38184.8 Da PI: 4.7205 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.7 | 1.6e-11 | 172 | 215 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr ++Pk + K++ +iL +++Y+k+L XP_022949638.1 172 LMAERRRRKRLNDRLSMLRAIVPKiS------KMDRTSILGDTIDYVKEL 215 589*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MELSQHGFLE ELLASTPWSS SYSNGFNDFF QNTWNFGCFD ENPQMGTSIS PHFPALQTAT 60 DFSFADQHLY TNFIEGFAMP ELDSSSYTRN NETPPFVSQE EMSNKNSGFP PVGMEEEELG 120 FMEAEAAPSV CKVEMEQMGG RETNDSKMGV AESRKRTSNK AKKIEGQPSK NLMAERRRRK 180 RLNDRLSMLR AIVPKISKMD RTSILGDTID YVKELLERIN NLKEEDEFGL DSNHVGFNAI 240 SKEGKPNEVQ VRNSPKFDIE KRESKTRIDI CCATRPGLLL STVNTLEALG LEIQQCVISC 300 FNDFSMQACC SEQGSGEKAV ASSDDIKEAL FRNAGYGGKC L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 175 | 182 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 2e-78 | bHLH family protein |