PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949573.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 278aa    MW: 30840 Da    PI: 9.8732
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949573.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.8e-14556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l+ +v+++G+g Wk I +        ++R+  ++k++w+++
   XP_022949573.1  5 KQKWTQEEEEALLAGVQKHGPGKWKNILKDPEfapflTHRSNIDLKDKWRNL 56
                     79************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQKQKWTQ EEEEALLAGV QKHGPGKWKN ILKDPEFAPF LTHRSNIDLK DKWRNLSVST  60
ASQGSKEKSR TPKAKAIVAA SVSNNQNSAL TKFNASADAA GEDPPNSAPQ DGKNVPRYHT  120
MIFEALSTIK DSNGCDIGTI VNFIEQRHEV PQNFRRQLSS KLRRLVSQGK LEKVQNCYKV  180
KKDNSLAVKT PTPKQKDVRQ RMSQYTMGGL MPSGETVEDA AKAAAYKVAD AENKSFLAAE  240
AVKEAERIAK MAEDTDSMLQ IIKEMYEKCS RGEIVLLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.22e-76MYB_related family protein