PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 313aa MW: 35543 Da PI: 5.0184 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.5 | 7.5e-14 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl XP_022949432.1 20 KGLWSPEEDEKLMRYMLSDGQGCWSDIARNAGLQRCGKSCRLRWINYL 67 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.7e-16 | 73 | 117 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E+el+v+++ + G++ W+ Ia++++ gRt++++k++w++ XP_022949432.1 73 RGAFSPQEEELIVHLHSLIGNR-WSQIASRLP-GRTDNEIKNFWNST 117 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MRKPEAGLGK ENVEKNKYRK GLWSPEEDEK LMRYMLSDGQ GCWSDIARNA GLQRCGKSCR 60 LRWINYLRPD LKRGAFSPQE EELIVHLHSL IGNRWSQIAS RLPGRTDNEI KNFWNSTLKK 120 RLKNNLSSTP FSNHESSDPR LDMMFGGIMA MQEHEIMSMN LSMDSSSTSS SSSQLPFSAT 180 GHNSLDGSSM PFLDNNFEMA SMVGATNGFL QAPGGCATEM GMRMIMEERL SYGSLEAQRS 240 MEVEREVLCL PHEEMNNRSN FDEYLGTNEQ NLNVEEMFGD MGSHGQVQES LKMGNEWDLE 300 SFMLDISSFP HFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 1e-71 | MYB family protein |