PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949239.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 192aa    MW: 21945.5 Da    PI: 7.616
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949239.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-18752251
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaark 51
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++
  XP_022949239.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAAR 52
                    69******9.**********8.....334*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARIMCCPNNL  60
PTNHNAPRHS LSAPPPSSNL LTPTLIEKLQ KCRTASFQMV KKQFPNKTHF SDRKSAHPSR  120
RQPTNFDDGY GASGVHFPET DSKWVAGGEA QEIARLEDDH VEQMIQELLD LGSFEFCPNN  180
NNYLNDIEST NN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.14e-37ERF family protein