PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948862.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 517aa MW: 57800 Da PI: 7.898

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948862.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.1e-08	395	443	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022948862.1 395 SWTLSEVMKLVEGVSKYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 443 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVAC 120 SGINKLSGTV NRQTTDDIFN LAPGSCNASF LGNVDFGYPQ GFCSTDLGVD LSFAGGHNVG 180 FDQKDAKLMI SSSTGSSGCS GSSTACLNDE NMSDDRPVKR KRLSSCDSSK INSEHIESKI 240 VPFNEGNKVE TLVTEKRLRK PPRRYSEESI EQKSRSNFKK SALKASKDKS LPSVCHRHQW 300 QKKLKAAPIV PKDKSFNGGC IQVPFGLPIE EGHSTKKRIC WEPEEIKDNR ILCIKDKNDV 360 ESFSAESEDE NTEDECVTKG NTTQKGNSRR KHHISWTLSE VMKLVEGVSK YGVGRWTEIK 420 RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVLGR KQALQQVPES VLCRVRELAA 480 IYPYPRENKS KETCSAPTTS SFKSSTSNML VCLPTVM

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL  60
DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVAC  120
SGINKLSGTV NRQTTDDIFN LAPGSCNASF LGNVDFGYPQ GFCSTDLGVD LSFAGGHNVG  180
FDQKDAKLMI SSSTGSSGCS GSSTACLNDE NMSDDRPVKR KRLSSCDSSK INSEHIESKI  240
VPFNEGNKVE TLVTEKRLRK PPRRYSEESI EQKSRSNFKK SALKASKDKS LPSVCHRHQW  300
QKKLKAAPIV PKDKSFNGGC IQVPFGLPIE EGHSTKKRIC WEPEEIKDNR ILCIKDKNDV  360
ESFSAESEDE NTEDECVTKG NTTQKGNSRR KHHISWTLSE VMKLVEGVSK YGVGRWTEIK  420
RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVLGR KQALQQVPES VLCRVRELAA  480
IYPYPRENKS KETCSAPTTS SFKSSTSNML VCLPTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	7e-30	MYB_related family protein