PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948812.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 297aa    MW: 33699.1 Da    PI: 4.4737
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948812.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30130187359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d+++++itY+++Hnh+
  XP_022948812.1 130 DFWSWRKYGQKPIKGSPYPRGYYRCSTTkGCSAKKQVERCKTDGSMFIITYTSTHNHP 187
                     99***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRNKRWQLGR VILSSTLFLS PHSLSLPLFI TNAQQSLCSY VPASNSQQQE QQEQEQIAIA  60
IAMELSSVHS LSPKPNPDDD NDTNLSTQLI PEATSKKRKV LQKTVVTVKI GSKKAAIGVG  120
KMKNEGPPPD FWSWRKYGQK PIKGSPYPRG YYRCSTTKGC SAKKQVERCK TDGSMFIITY  180
TSTHNHPGPN ISTLNLDQTQ EQNQPQPLDQ GQNQDGHPNQ GLEKQDQDQS EEEEEEELSM  240
EEEEEEEEEE EEEEEKANKT EVENHDHFFD ELEELPSPQP FSSYFFDEIR LISAAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196123KKRKVLQKTVVTVKIGSKKAAIGVGKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.23e-33WRKY family protein