PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948811.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 309aa MW: 35242.6 Da PI: 4.3246

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948811.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2e-30	142	199	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d+++++itY+++Hnh+ XP_022948811.1 142 DFWSWRKYGQKPIKGSPYPRGYYRCSTTkGCSAKKQVERCKTDGSMFIITYTSTHNHP 199 99*********************9988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MRNKRWQLGR VILSSTLFLS PHSLSLPLFI TNAQQSLCSY VPASNSQQQE QQEQEEQQEQ 60 EEQQEQEQIA IAIAMELSSV HSLSPKPNPD DDNDTNLSTQ LIPEATSKKR KVLQKTVVTV 120 KIGSKKAAIG VGKMKNEGPP PDFWSWRKYG QKPIKGSPYP RGYYRCSTTK GCSAKKQVER 180 CKTDGSMFII TYTSTHNHPG PNISTLNLDQ TQEQNQPQPL DQGQNQDGHP NQGLEKQDQD 240 QSEEEEEEEL SMEEEEEEEE EEEEEEEKAN KTEVENHDHF FDELEELPSP QPFSSYFFDE 300 IRLISAAPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	135	KKRKVLQKTVVTVKIGSKKAAIGVGKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58710.2	2e-33	WRKY family protein