PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948777.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 860aa MW: 95136.2 Da PI: 7.393

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948777.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.3	6.7e-19	330	429	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022948777.1 330 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGQ 422 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022948777.1 423 LVMGFRK 429 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 860 aa Download sequence
MASSRCMNTS CGAATPHDWT KGWPLGSAGF AHLCLNCGSA YENLVFCDTY HSEETGWRDC 60 SFCGKRIHCG CIASKSMFEY LDYGGIGCTT CVKRSRLDVI RRDEISNGFD AVTVGNVGLL 120 RPASVEDRVV RNGIKEEKLL QLCNIMEANE TDHFQQAQRV DRSASPAQNK GENLRSPFGE 180 VGTSFFNMTK LPVKCQPSVG SVAYSQLDTR LKDMQESLSQ PSLNITLGVP LGTPNFVVPL 240 SGSAAEEDEK SILPFQQGHR SRPIFPKPLK TGTTVNSETR KGMTPLVRIA RPPAEGRGKN 300 QLLPRYWPRI TDQELEQISG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS 360 QSEGLPVRIQ DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG 420 GQLVMGFRKA TNSSDTQDAK ISTLPNGSHS GDASFSGVFQ NLPLRAGDIS LHKIENFGGR 480 MTSGQQPMST MDKKGTRNIG SKNKRLLMHS EDALELRLTW EEAQDLLRPP PSANPTIVTI 540 DDHEFEEYDE PPVFGKRTIF TVRPTGEQKQ WAQCDDCSKW RKLPVDVLLP PKWTCSDNIW 600 DLSRCTCSAP EEMNTKEQEN LLRASKDFKK RKIMKSQKSA QELEPSGLDA LASAAVLGDS 660 MADLQESGTT TRHPRHRQGC TCIVCIQPPS GKGKHKSTCT CNVCLTVKRR FKTLMLRKKK 720 RLSEREMETS LKEGNSQFDE SGTSGTLRGT SLQTNHSENE RSQIRVKDEE AANSSGQIDL 780 NCHPDREDMQ LEVAGLSMMS LVEAASQPLD SYSKQIGVSS VTSEQQSSQP SSAESERRLS 840 EEGCHGSAHE STSDRCRGHH

Sequence ? help Back to Top

Protein Sequence Length: 860 aa Download sequence

MASSRCMNTS CGAATPHDWT KGWPLGSAGF AHLCLNCGSA YENLVFCDTY HSEETGWRDC  60
SFCGKRIHCG CIASKSMFEY LDYGGIGCTT CVKRSRLDVI RRDEISNGFD AVTVGNVGLL  120
RPASVEDRVV RNGIKEEKLL QLCNIMEANE TDHFQQAQRV DRSASPAQNK GENLRSPFGE  180
VGTSFFNMTK LPVKCQPSVG SVAYSQLDTR LKDMQESLSQ PSLNITLGVP LGTPNFVVPL  240
SGSAAEEDEK SILPFQQGHR SRPIFPKPLK TGTTVNSETR KGMTPLVRIA RPPAEGRGKN  300
QLLPRYWPRI TDQELEQISG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS  360
QSEGLPVRIQ DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG  420
GQLVMGFRKA TNSSDTQDAK ISTLPNGSHS GDASFSGVFQ NLPLRAGDIS LHKIENFGGR  480
MTSGQQPMST MDKKGTRNIG SKNKRLLMHS EDALELRLTW EEAQDLLRPP PSANPTIVTI  540
DDHEFEEYDE PPVFGKRTIF TVRPTGEQKQ WAQCDDCSKW RKLPVDVLLP PKWTCSDNIW  600
DLSRCTCSAP EEMNTKEQEN LLRASKDFKK RKIMKSQKSA QELEPSGLDA LASAAVLGDS  660
MADLQESGTT TRHPRHRQGC TCIVCIQPPS GKGKHKSTCT CNVCLTVKRR FKTLMLRKKK  720
RLSEREMETS LKEGNSQFDE SGTSGTLRGT SLQTNHSENE RSQIRVKDEE AANSSGQIDL  780
NCHPDREDMQ LEVAGLSMMS LVEAASQPLD SYSKQIGVSS VTSEQQSSQP SSAESERRLS  840
EEGCHGSAHE STSDRCRGHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	708	719	KRRFKTLMLRKK
2	708	721	KRRFKTLMLRKKKR
3	716	722	LRKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein