PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948464.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 355aa MW: 39208.5 Da PI: 7.7584

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948464.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.2	3.8e-25	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e XP_022948464.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 119 79***************************************997 PP
2	QLQ	62.1	1.5e-21	10	45	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l++Ky+++++P+Pp+L++ ++ XP_022948464.1 10 SPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVK 45 89******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNSGPKPCVS PFTPTQWQEL EHQALIFKYM VSGVPIPPDL IFSVKRSLDS SISARLFPHQ 60 PIGWGCFEMG FGRKADPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI 120 SSTPPAQTPP PLILTSTRSL SASSPTSSSY SLSTLSSSSS LTCETQSYHQ APAPAPAPAP 180 AAYQESSIHP YLYPQSSSSR PPCSDFSPNS TNPQLFLYSG THPQADKDYR DINGPREGVG 240 VQAFFPSVAD SARSIGEVYS QPIGMDSYKG FSHAVSNSHQ IYSSKQARQQ QEQHCFVLGT 300 DFNKSTRSAK TEEEDDAETQ KPLLHFFEDC PPKNSDSWLD LATNSSIQSG NFIGL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNSGPKPCVS PFTPTQWQEL EHQALIFKYM VSGVPIPPDL IFSVKRSLDS SISARLFPHQ  60
PIGWGCFEMG FGRKADPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG RNRSRKPVEI  120
SSTPPAQTPP PLILTSTRSL SASSPTSSSY SLSTLSSSSS LTCETQSYHQ APAPAPAPAP  180
AAYQESSIHP YLYPQSSSSR PPCSDFSPNS TNPQLFLYSG THPQADKDYR DINGPREGVG  240
VQAFFPSVAD SARSIGEVYS QPIGMDSYKG FSHAVSNSHQ IYSSKQARQQ QEQHCFVLGT  300
DFNKSTRSAK TEEEDDAETQ KPLLHFFEDC PPKNSDSWLD LATNSSIQSG NFIGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-66	GRF family protein