PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948357.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 447aa MW: 48853.2 Da PI: 6.356

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948357.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.2e-39	108	168	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrk+k+s XP_022948357.1 108 PDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSA 168 78999****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MFDSSKDPSF TLFGRKIPLS DDGEPPPIHS HAHDSPSDKD APPGKESTVD DDDEKTVDDS 60 DDSINLDAGE EVSVNPKTPS IDEEEAANPI NGKPESENSN SEKTLKKPDK LLPCPRCKSM 120 ETKFCYYNNY NVNQPRHFCK ACQRYWTAGG TMRNVPVGAG RRKSKNSASY YRHITISEAL 180 DAARIEPPNG TDKPKFICNN GRVLSFNMES QNSEPMVGSV LNLAENRVLS NGVKKFEEKG 240 SEVCDKSSNL SSMAVQSSSE SHTQKINGFP SQISCLSGVP WPFVWNSSVP PPAFCPPGFP 300 SLTFVPAAAW NCGAPGPWNT TWFSPQASSA EKSLCSDTKA SSTLGKHQRD NEMAKEEWIS 360 SKEEGLKQRN GYVLTPKTLR IDDPSEAAKS SIWATLGIKN ESITGGKNLF KTFQPKGHEK 420 THTAETSSVL QANPAALSRS LVFHESS

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MFDSSKDPSF TLFGRKIPLS DDGEPPPIHS HAHDSPSDKD APPGKESTVD DDDEKTVDDS  60
DDSINLDAGE EVSVNPKTPS IDEEEAANPI NGKPESENSN SEKTLKKPDK LLPCPRCKSM  120
ETKFCYYNNY NVNQPRHFCK ACQRYWTAGG TMRNVPVGAG RRKSKNSASY YRHITISEAL  180
DAARIEPPNG TDKPKFICNN GRVLSFNMES QNSEPMVGSV LNLAENRVLS NGVKKFEEKG  240
SEVCDKSSNL SSMAVQSSSE SHTQKINGFP SQISCLSGVP WPFVWNSSVP PPAFCPPGFP  300
SLTFVPAAAW NCGAPGPWNT TWFSPQASSA EKSLCSDTKA SSTLGKHQRD NEMAKEEWIS  360
SKEEGLKQRN GYVLTPKTLR IDDPSEAAKS SIWATLGIKN ESITGGKNLF KTFQPKGHEK  420
THTAETSSVL QANPAALSRS LVFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	3e-99	Dof family protein