PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948139.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 313aa    MW: 35866.6 Da    PI: 6.6386
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948139.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.51.4e-35151052101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+ye+++d+ +++++sws++g sfvv+++ efak++Lp yFkh+nf+SFvRQLn+YgF+kv++++         weF+++ F +g+++ll++
  XP_022948139.1  15 FLTKTYEMVDDPMTNSVVSWSKSGYSFVVWNPPEFAKELLPVYFKHNNFSSFVRQLNTYGFRKVDRDQ---------WEFANEGFIRGRTHLLKS 100
                     9****************************************************************998.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_022948139.1 101 IHRRK 105
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEGSDGSYGG APPPFLTKTY EMVDDPMTNS VVSWSKSGYS FVVWNPPEFA KELLPVYFKH  60
NNFSSFVRQL NTYGFRKVDR DQWEFANEGF IRGRTHLLKS IHRRKPIFSH SQSQSQSHGS  120
GAPLSELERQ ELELKIKTLH QEKTILQTQL QEHENEKEQI GRQIQTMCQQ IWRMGNQQKQ  180
LIAIMAAELQ KDQSRKRRKI GKLSEFLGEE WLEVERDERN GLKNGLEVPA LELMGKLEVS  240
LGLCEDLLCN VAEVLGGEMS GKRKEMEGKG VKEGEKRGEN GVNDVFWEQF LTEVPGCSNG  300
GEVYLDRRSN VLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.13e-57HSF family protein