PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948020.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 394aa MW: 43964.4 Da PI: 8.6647

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948020.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.1	2.7e-30	249	305	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGse.kAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs+ +AtPk+i+elm+v+gLt+++vkSHLQk+Rl+ XP_022948020.1 249 KQRRCWSPELHRRFVSALQQLGGSQaVATPKQIRELMQVDGLTNDEVKSHLQKFRLH 305 79*******************8647**************************97 PP
2	Myb_DNA-binding	43.3	8.7e-14	251	303	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m+ g+t ++ks++qk++ XP_022948020.1 251 RRCWSPELHRRFVSALQQLGGSqavaTPKQIRELMQvDGLTNDEVKSHLQKFR 303 568***************99***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MGSLSPELSL DFRSTFVPKS ISDFFKQVSM IDNVCERVTK LNDFVKSLED EMRKIDAFKR 60 ELPLCMILLK DAILAVKEEE SMQCSVSRTQ PVLEEFKSLK KEFDEQDFRN GKNYRDQKNW 120 MRSVQLWNSD DSKRDSKFET KINEKGGPVV TQVSLQFCRN KNSERSQVPL KAYSVFPSAM 180 AVRKEDKEEF PIHGLSLCTP GIKNPIEESA SSGSRSSGTR AVSSSAMTAP VSLQTGTQQQ 240 QQQQQLSRKQ RRCWSPELHR RFVSALQQLG GSQAVATPKQ IRELMQVDGL TNDEVKSHLQ 300 KFRLHTRRLP ASTVTPTNQS IVVLGGLLVA EDQFGESSKA CSSQSASPQG PLQLGGTGGT 360 STTGGDSTED DDNDVKSESY SWKSRSKRTG KEDA

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MGSLSPELSL DFRSTFVPKS ISDFFKQVSM IDNVCERVTK LNDFVKSLED EMRKIDAFKR  60
ELPLCMILLK DAILAVKEEE SMQCSVSRTQ PVLEEFKSLK KEFDEQDFRN GKNYRDQKNW  120
MRSVQLWNSD DSKRDSKFET KINEKGGPVV TQVSLQFCRN KNSERSQVPL KAYSVFPSAM  180
AVRKEDKEEF PIHGLSLCTP GIKNPIEESA SSGSRSSGTR AVSSSAMTAP VSLQTGTQQQ  240
QQQQQLSRKQ RRCWSPELHR RFVSALQQLG GSQAVATPKQ IRELMQVDGL TNDEVKSHLQ  300
KFRLHTRRLP ASTVTPTNQS IVVLGGLLVA EDQFGESSKA CSSQSASPQG PLQLGGTGGT  360
STTGGDSTED DDNDVKSESY SWKSRSKRTG KEDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	7e-45	G2-like family protein