PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947901.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 759aa    MW: 86204 Da    PI: 5.3971
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947901.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.84.3e-1073817551373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+avss+d + a++lL++++++++ +gd +qR+a++f++AL+ar+++++++     ++  +s+ + ++ l+a+++ +  +P+ k+s 
  XP_022947901.1 381 LRNLLILCAQAVSSDDRRIANELLKKIRQHSTTNGDGFQRMAHFFANALEARMVGTGTGSIIHYESLIQSKISAADMLKAYQAHFSSCPFKKLSL 475
                     6899***************************************************6666555555666666679********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +   ++Il+ +++++ +HiiDf+i +G+ Wp L+q L++ p+gpp+lRiTg+++p +g   +e++ e g+rLak+++++ vpf++++++++++e+
  XP_022947901.1 476 FFMVKMILKVADKAKSLHIIDFGICYGFLWPMLIQFLSQLPDGPPKLRITGIDHPLPGfrPAEKIDESGRRLAKYCKRFTVPFQYQAIASDNWET 570
                     *******************************************************99999****************************999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e++++++ ++l+Vn+ ++  +llde+v+ +s+rd vL+lv++++P+++v++  + ++ ++ F +rf eal ++sal+dsl+++lpreseer+
  XP_022947901.1 571 IRIEDFKLDSSDVLVVNCFYRFNNLLDETVEETSPRDIVLRLVREMNPNLFVHSITNGSYHAPFFITRFREALFHFSALYDSLDVNLPRESEERM 665
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++Ere+lgr+i+nvvacega+r+er e++++W+ r  +aGF+++pl+++++++ ++ l +++ + + ++e++g++++gWk+r +++ ++W
  XP_022947901.1 666 MIEREYLGRQIMNVVACEGAQRVERPESYKQWQVRCIRAGFRQLPLDKEMMNKFRSKLTTHYHKDFVLDEDNGWILQGWKGRIVYASCCW 755
                     **************************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MDPNLNGFPD HEADYNSDYQ ALLTQLRDLP NRSIDGFRLN DWASLPTSYP YPEFNNPSPD  60
HVPFIQNSVF PSDPDPNQFS SPSSERAKGE PRSGSVGLNS DGGAKGVALG LSPGGDSSSD  120
ESDFKETVLK YISQMLMEEN LEEMPCMFYD PMGLKVTEKS FYDALSENYP PSPNQPPLDC  180
ESSEDQWAVD PVEHTPPVLR RPFPSNEYQS NFEVTSGNQS NLITNSHEFA TELLAQNIFS  240
DSTSILQYQK GLEEARKFLP GGEQLNIDLG SSILTGVASK VMDTTEKVKR ENSPNGSKGR  300
KNREREDVDL DSEEGRRNKH ATIYGDEEEL SEMFDKVLLH DYGGNETSAN GKLQYNGQLH  360
GSIAGKAREK KQEKRKDSVD LRNLLILCAQ AVSSDDRRIA NELLKKIRQH STTNGDGFQR  420
MAHFFANALE ARMVGTGTGS IIHYESLIQS KISAADMLKA YQAHFSSCPF KKLSLFFMVK  480
MILKVADKAK SLHIIDFGIC YGFLWPMLIQ FLSQLPDGPP KLRITGIDHP LPGFRPAEKI  540
DESGRRLAKY CKRFTVPFQY QAIASDNWET IRIEDFKLDS SDVLVVNCFY RFNNLLDETV  600
EETSPRDIVL RLVREMNPNL FVHSITNGSY HAPFFITRFR EALFHFSALY DSLDVNLPRE  660
SEERMMIERE YLGRQIMNVV ACEGAQRVER PESYKQWQVR CIRAGFRQLP LDKEMMNKFR  720
SKLTTHYHKD FVLDEDNGWI LQGWKGRIVY ASCCWVPAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein