PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022947875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 242aa MW: 27680.9 Da PI: 6.788 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd++l +v+++G++ W+ ++ g+ R++k+c++rw++yl XP_022947875.1 14 RGAWSSEEDDKLMGYVQKHGPRKWRQLPSLAGLARCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T eE +l++++++++G++ W+ +a ++ gRt++++k++w+ + XP_022947875.1 67 KGNYTDEENDLIYKLHEMHGNR-WSMVATKLS-GRTDNEIKNHWNAH 111 7999******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MVRAPIVDKD GVKRGAWSSE EDDKLMGYVQ KHGPRKWRQL PSLAGLARCG KSCRLRWLNY 60 LRPGLKKGNY TDEENDLIYK LHEMHGNRWS MVATKLSGRT DNEIKNHWNA HLKKQIERKS 120 ESSTQPKPKK LRPNIASDLE AKTEEFTGYC STKFGIVESS SLSVQTSSSS SDANFGRLNW 180 AVEEYDRSGY GDLWNEPFMW DGDDVSYVLD GSMQFSADNG MFSPQVHETT YDDYIDLFCS 240 LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34990.1 | 4e-53 | MYB family protein |