PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947674.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 222aa MW: 25129.3 Da PI: 10.8261

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947674.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	4e-16	32	77	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+q+G+ +W+ Ia+++ R++k+c++rw++ XP_022947674.1 32 RGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFE-ARSGKSCRLRWYNQ 77 899***************************.**********96 PP
2	Myb_DNA-binding	49.9	7.6e-16	84	127	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ +++G++ W++Iar++ gRt++ +k++++ XP_022947674.1 84 KNPFTEEEEERLLIFQRLHGNK-WALIARHFK-GRTDNAVKNHYHV 127 689*****************.****9.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MRMIGSRSSS SSSGGGGGGG CGSGSSGVTC YRGHWRPAED NKLRQLVEQF GPQNWNYIAE 60 HFEARSGKSC RLRWYNQLDP NINKNPFTEE EEERLLIFQR LHGNKWALIA RHFKGRTDNA 120 VKNHYHVIMA RRRRERFTIF TNNNNILRSR HCLLSFSNVL QSSHQKMTPK WSPLTAGPML 180 ENGRGKSVAA VASSGSGERE EEMKGEKKRR IPFIDFLGMG SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	5e-61	MYB family protein