PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947347.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 357aa MW: 40819.7 Da PI: 4.7723

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947347.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.7	7.7e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL +k++g+++el e+i+e+d+yk+ePw+Lp k + +++ ewyf+s+rd+ky++g+r+nrat+ gyWkatgkd++v XP_022947347.1 6 LPPGFRFHPTDEELVAYYLDRKINGRSIEL-EIIPEIDLYKCEPWELPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRTVQ 99 79**************************.99**********96435566888********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+ykgrap+g +t+Wvmheyrl XP_022947347.1 100 S-QKRAVGMKKTLVYYKGRAPHGIRTNWVMHEYRL 133 9.9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MAPMTLPPGF RFHPTDEELV AYYLDRKING RSIELEIIPE IDLYKCEPWE LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRGGYWK ATGKDRTVQS QKRAVGMKKT LVYYKGRAPH 120 GIRTNWVMHE YRLLDSQLAN ATSSPSTKDS YALCRVFKKT TLVPKVIGEK EIEGNADAPT 180 WQTADEHDMQ VDDSGGPESS RGGMESNEDV DSFGHFLHEY NPKIFSSENS SSDLTQGNVA 240 DDLPAPVASD NEANSAANNL YPIYIDCPSN FMQIPSKFMD HENLHYQHPY YPPLELEDFP 300 QLNIMGETKT LMKPECIDEY MKFDKFRDSM NGTLEEILSL CSLPMQEDNV QNSSLLQ

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MAPMTLPPGF RFHPTDEELV AYYLDRKING RSIELEIIPE IDLYKCEPWE LPDKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRGGYWK ATGKDRTVQS QKRAVGMKKT LVYYKGRAPH  120
GIRTNWVMHE YRLLDSQLAN ATSSPSTKDS YALCRVFKKT TLVPKVIGEK EIEGNADAPT  180
WQTADEHDMQ VDDSGGPESS RGGMESNEDV DSFGHFLHEY NPKIFSSENS SSDLTQGNVA  240
DDLPAPVASD NEANSAANNL YPIYIDCPSN FMQIPSKFMD HENLHYQHPY YPPLELEDFP  300
QLNIMGETKT LMKPECIDEY MKFDKFRDSM NGTLEEILSL CSLPMQEDNV QNSSLLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-103	NAC family protein