PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947008.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 423aa MW: 50337.2 Da PI: 8.2795

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947008.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.3	1e-16	46	137	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk+ +++ +++ l lp+kf+ ++ + + tl+ ++g Wev+l +k++g++ +++GW eFv+ ++k+g fvvF+l+g+++f +v XP_022947008.1 46 FFKIILHHTLIERK-LDLPNKFVINNRAS-LLHNNATLTLPDGANWEVEL--KKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCF--NVL 134 77888777777776.******999433.45667999999*****..***********************************9..888 PP EE- CS B3 96 vfr 98 +f+ XP_022947008.1 135 IFD 137 887 PP
2	B3	66.1	5e-21	322	420	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 f ++ ps+ + + l+lp++fae++ + es++++le +gr W+v + ++ +++r+ l+ GWk+F+ +n+LkegD++vF+l++r + + XP_022947008.1 322 FMVTMRPSYIQTGNYLSLPRSFAERYL-Q--ESTDVKLEVADGRIWSVWCgvRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRiPKVFF 413 778999******************4.4..5679*********98667778888899***********************99988889 PP EEEEE-S CS B3 93 vvkvfrk 99 +v++fr+ XP_022947008.1 414 KVTIFRR 420 9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MINFGRVLHD FIDYCCVFTI NNKQKPNLKH KQSLRMAFFT SPIPHFFKII LHHTLIERKL 60 DLPNKFVINN RASLLHNNAT LTLPDGANWE VELKKSDGKV SFARGWPEFV EFYNVKAGYF 120 VVFRLEGNRC FNVLIFDLSA TEIDYPIKPR IFRRLRKDHT RAFDRRPPIL LPKSENEDDE 180 DDSVVVLNDA VSRKRKREKD HEAAFCSLRE MKKMMRTNMK IKHQRFTTPQ RFSDDEEEDE 240 DEDEDEDEEE EEDEEDDEEE DYSWRQRKYR GSARNHEDGG RFSPESMRPM HPPRTPKPLT 300 ENQERVLRIA SSFKLRTKNP SFMVTMRPSY IQTGNYLSLP RSFAERYLQE STDVKLEVAD 360 GRIWSVWCGV RWAFTRRRTE LKCGWKRFAV DNQLKEGDVC VFELMNRIPK VFFKVTIFRR 420 PAN

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MINFGRVLHD FIDYCCVFTI NNKQKPNLKH KQSLRMAFFT SPIPHFFKII LHHTLIERKL  60
DLPNKFVINN RASLLHNNAT LTLPDGANWE VELKKSDGKV SFARGWPEFV EFYNVKAGYF  120
VVFRLEGNRC FNVLIFDLSA TEIDYPIKPR IFRRLRKDHT RAFDRRPPIL LPKSENEDDE  180
DDSVVVLNDA VSRKRKREKD HEAAFCSLRE MKKMMRTNMK IKHQRFTTPQ RFSDDEEEDE  240
DEDEDEDEEE EEDEEDDEEE DYSWRQRKYR GSARNHEDGG RFSPESMRPM HPPRTPKPLT  300
ENQERVLRIA SSFKLRTKNP SFMVTMRPSY IQTGNYLSLP RSFAERYLQE STDVKLEVAD  360
GRIWSVWCGV RWAFTRRRTE LKCGWKRFAV DNQLKEGDVC VFELMNRIPK VFFKVTIFRR  420
PAN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	199	RKRKREK
2	193	222	RKRKREKDHEAAFCSLREMKKMMRTNMKIK
3	194	223	RKRKREKDHEAAFCSLREMKKMMRTNMKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-23	B3 family protein