PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022946771.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Whirly
Protein Properties Length: 272aa    MW: 30420.6 Da    PI: 9.5734
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022946771.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly207.91.2e-64942311138
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     s+yk+kaal+v+++ p+f+ ldsg++k++r+G++ll++a+a+++r+ydW++kq+f+ls+te+++lv l+++esce+fhdp +++s+eGkvrk lk
  XP_022946771.1  94 SIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKMLK 188
                     7********************************************************************************************** PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                     vePlpdGsG f+nlsv+n+l++++es+++P++kae++vl +++
  XP_022946771.1 189 VEPLPDGSGRFFNLSVQNKLTNVDESIYIPITKAEYTVLVEAF 231
                     ***************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MLRLQCLSSS LLPPLIPELS PETSSNRRLC RLNSFRPLLT LSTTPKSSPK CQYSWNTQQH  60
QAAFESGFQT DSFSSQTRAG AAAALPPRFF VGHSIYKGKA ALTVEPRPPE FTPLDSGAFK  120
ISREGFVLLQ FAPAAGVRQY DWSRKQVFSL SVTELGSLVA LGPRESCELF HDPYKGKSDE  180
GKVRKMLKVE PLPDGSGRFF NLSVQNKLTN VDESIYIPIT KAEYTVLVEA FKFILPHLMG  240
WHAIANSTTR TEDNRRANDA NPRYGGDFEW SR