PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022946729.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 334aa    MW: 37164.6 Da    PI: 8.5794
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022946729.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.76.9e-32194250158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF
  XP_022946729.1 194 DGPIYVNAKQYHGILRRRQSRAKLEAQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 250
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MNMMAIPLKN FSQKNLDQDS VHSVFPFSVD CTPWRSSNER KIPLPLSDNT TLKLETPPQH  60
HHKHLGFQLP DQESSTAHSI GESLHKVCTM EVQNAQEQCI SSESGQEENC GESVENQMKP  120
IILFSNPEFM FNSPQVDGSQ PMTRVSYPYV DPYYGGLLCS AYSQQAINNQ AQVNTNVVGI  180
APARVPIPHA LAEDGPIYVN AKQYHGILRR RQSRAKLEAQ NRVIRNRKPY LHESRHLHAL  240
NRVRGSGGRF LSSKKNQSPV QSTPSTTLSQ QMNTPDFSTC ISETSDRGVS SEITTSISNG  300
SVRFGRSDSQ LSALSSRMGG RMEQYSGDLM RGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-46NF-YA family protein