PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022946728.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 393aa    MW: 44067.1 Da    PI: 8.3057
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022946728.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.48.9e-32253309158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF
  XP_022946728.1 253 DGPIYVNAKQYHGILRRRQSRAKLEAQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 309
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MNWILHFFVF TILVALCCLL IFECMWSLRS PRCLFSDACA RAVVVWFKPQ FLSFCGLLEL  60
LMNMMAIPLK NFSQKNLDQD SVHSVFPFSV DCTPWRSSNE RKIPLPLSDN TTLKLETPPQ  120
HHHKHLGFQL PDQESSTAHS IGESLHKVCT MEVQNAQEQC ISSESGQEEN CGESVENQMK  180
PIILFSNPEF MFNSPQVDGS QPMTRVSYPY VDPYYGGLLC SAYSQQAINA QVNTNVVGIA  240
PARVPIPHAL AEDGPIYVNA KQYHGILRRR QSRAKLEAQN RVIRNRKPYL HESRHLHALN  300
RVRGSGGRFL SSKKNQSPVQ STPSTTLSQQ MNTPDFSTCI SETSDRGVSS EITTSISNGS  360
VRFGRSDSQL SALSSRMGGR MEQYSGDLMR GGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-46NF-YA family protein