PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946727.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YA

Protein Properties

Length: 395aa MW: 44309.3 Da PI: 8.3057

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946727.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	101.4	8.9e-32	255	311	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF XP_022946727.1 255 DGPIYVNAKQYHGILRRRQSRAKLEAQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 311 57**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MNWILHFFVF TILVALCCLL IFECMWSLRS PRCLFSDACA RAVVVWFKPQ FLSFCGLLEL 60 LMNMMAIPLK NFSQKNLDQD SVHSVFPFSV DCTPWRSSNE RKIPLPLSDN TTLKLETPPQ 120 HHHKHLGFQL PDQESSTAHS IGESLHKVCT MEVQNAQEQC ISSESGQEEN CGESVENQMK 180 PIILFSNPEF MFNSPQVDGS QPMTRVSYPY VDPYYGGLLC SAYSQQAINN QAQVNTNVVG 240 IAPARVPIPH ALAEDGPIYV NAKQYHGILR RRQSRAKLEA QNRVIRNRKP YLHESRHLHA 300 LNRVRGSGGR FLSSKKNQSP VQSTPSTTLS QQMNTPDFST CISETSDRGV SSEITTSISN 360 GSVRFGRSDS QLSALSSRMG GRMEQYSGDL MRGGR

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MNWILHFFVF TILVALCCLL IFECMWSLRS PRCLFSDACA RAVVVWFKPQ FLSFCGLLEL  60
LMNMMAIPLK NFSQKNLDQD SVHSVFPFSV DCTPWRSSNE RKIPLPLSDN TTLKLETPPQ  120
HHHKHLGFQL PDQESSTAHS IGESLHKVCT MEVQNAQEQC ISSESGQEEN CGESVENQMK  180
PIILFSNPEF MFNSPQVDGS QPMTRVSYPY VDPYYGGLLC SAYSQQAINN QAQVNTNVVG  240
IAPARVPIPH ALAEDGPIYV NAKQYHGILR RRQSRAKLEA QNRVIRNRKP YLHESRHLHA  300
LNRVRGSGGR FLSSKKNQSP VQSTPSTTLS QQMNTPDFST CISETSDRGV SSEITTSISN  360
GSVRFGRSDS QLSALSSRMG GRMEQYSGDL MRGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72830.1	4e-46	NF-YA family protein