PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022946410.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 317aa    MW: 34522.4 Da    PI: 4.3572
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022946410.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024290313123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++ F +   L++H +  H
  XP_022946410.1 290 FPCKSCKRAFGSETALQSHTKAkH 313
                     89*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEFWGAEVKA GEPLLVSPGE ENILHLSQAC LGESKSKGSE QVFLYVKVGN QKLVLGTLSS  60
EKFPQVSFDL VFDKDFELSH NWKNGSVHFT GYLSLLPEEE ESYTDSEEDL PQAVIDNGKP  120
EPQPQPQPKK DEKPGTSGTK KKVQIVEPNK GGSIDTKKNA DSSDEDDDDN EDSSDDENAN  180
GGEEDDSDDE NEFSGDDSDD DDENEDLDDS MEEDEQTPKK AEASKKRPLE AANKTPAPDK  240
KTKLVTPQKT DGKKGVPHVA TPHPSKQAGK MPAASDQNKQ QTPKSASGAF PCKSCKRAFG  300
SETALQSHTK AKHSAEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.22e-36C2H2 family protein