PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022946339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 18077.1 Da PI: 6.6326 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 9 | 59 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +g+Wv+eIr+p+ + r++lg+f tae+Aa a++ a+++l+g+ XP_022946339.1 9 IYRGVRRRN-TGKWVSEIREPR----KpNRIWLGTFPTAEMAAVAYDVAALALKGH 59 69****887.9*********94....478************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MATSGRHPIY RGVRRRNTGK WVSEIREPRK PNRIWLGTFP TAEMAAVAYD VAALALKGHD 60 THLNFPNSAS SLPVPASRSP SDIQAAAASA AAALGAAAAA IEARSGFHGG RSNDPGEVGN 120 HFMDEDLIFD MPNVLMNMAE GMLLSPPRFN NHGGDDDGAD HGTGNLWNFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 3e-42 | ERF family protein |