PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946336.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 466aa MW: 51493 Da PI: 6.912

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946336.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.3	2.6e-31	265	320	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_022946336.1 265 KARRYWSPDLHRRFVNALQTLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 320 689***************************************************97 PP
2	Myb_DNA-binding	39.2	1.6e-12	267	318	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a + lGg t+k I + m g+t ++ks++qky+ XP_022946336.1 267 RRYWSPDLHRRFVNALQTLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 318 567***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDWKDHSYFM LLKSFVCDDD QVEAASCVEE DHSHSQTQLQ DLLSCLEGER LKIDAFKREL 60 PLCMHLLNNA LESCRQQVQA WRVKSKIHQQ NGEKPVVEEF IPLKQSTSQP SQTLSNISDR 120 SNWMTSAQLW SQTTNDESKP NLSSSKQQQQ PIDHQIGFIQ KLHTNSNNGG AFLPFSKDSI 180 LSNTHNSTPP QLPDLALAAA PATGGGNRQE FDGNKCGNSD HRQPENGRMV TGKVNLGGEG 240 EVITSNNANN NNITNNSTTQ NSHRKARRYW SPDLHRRFVN ALQTLGGSQV ATPKQIRELM 300 KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA AGAPAAQLVV LGGIWVPPDY AAHGGAPALY 360 GPHPTTYCGP PVHQDFYPPL PHHQLHHQHM LHQQLQMYKA ATAQPQISPD SDERGNGDRS 420 ESIEDGGKSE SGSWKVESGG EGKGNLAALR QEGGDESNGR EITLKF

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDWKDHSYFM LLKSFVCDDD QVEAASCVEE DHSHSQTQLQ DLLSCLEGER LKIDAFKREL  60
PLCMHLLNNA LESCRQQVQA WRVKSKIHQQ NGEKPVVEEF IPLKQSTSQP SQTLSNISDR  120
SNWMTSAQLW SQTTNDESKP NLSSSKQQQQ PIDHQIGFIQ KLHTNSNNGG AFLPFSKDSI  180
LSNTHNSTPP QLPDLALAAA PATGGGNRQE FDGNKCGNSD HRQPENGRMV TGKVNLGGEG  240
EVITSNNANN NNITNNSTTQ NSHRKARRYW SPDLHRRFVN ALQTLGGSQV ATPKQIRELM  300
KVDGLTNDEV KSHLQKYRLH TRRPSPSPQA AGAPAAQLVV LGGIWVPPDY AAHGGAPALY  360
GPHPTTYCGP PVHQDFYPPL PHHQLHHQHM LHQQLQMYKA ATAQPQISPD SDERGNGDRS  420
ESIEDGGKSE SGSWKVESGG EGKGNLAALR QEGGDESNGR EITLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	3e-46	G2-like family protein