PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022946029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 345aa MW: 38317 Da PI: 7.8978 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.5 | 2.3e-08 | 91 | 115 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+ C f G C+ G++C+FaHg XP_022946029.1 91 FKTRMCAKFKL-GLCRNGASCNFAHG 115 69*********.*************9 PP | |||||||
2 | zf-CCCH | 30.9 | 4.8e-10 | 150 | 174 | 1 | 25 |
--S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaH 25 +k++lCr f+ + +C+yGdrC+F H XP_022946029.1 150 QKMKLCRKFYNGEECPYGDRCNFLH 174 5999*******66************ PP | |||||||
3 | zf-CCCH | 41 | 3.3e-13 | 236 | 262 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +kt+lC + tG+C++G++C+FaHg+ XP_022946029.1 236 WKTKLCTKWEITGHCPFGEKCHFAHGQ 262 8************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MSFNDMRGSV IPPPLHSYGA NGDASGCWSQ YPRNDLFDPQ SQFEVQQPPF KRARNFEENQ 60 SSPMPYPNPP SNSRVQPPNA PMNKGINNIF FKTRMCAKFK LGLCRNGASC NFAHGVEDMR 120 QPPPNWQEIV GIREDDQSVS NWNDDQKIIQ KMKLCRKFYN GEECPYGDRC NFLHEDPAKF 180 RDDSGRFRES SAISIGTTGT PLINGSDSSY PEPIKAASSS VPDALRANGN SRPSFWKTKL 240 CTKWEITGHC PFGEKCHFAH GQSELQLSIG REGEVSNTAL NVKPLVVAME APSSLATSVP 300 SSALPEGQAK QSLLKWKGPK KINRIYADWL DDLPLSPSST SQLEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19360.1 | 3e-92 | C3H family protein |